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IVF0016246 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016246
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTetratricopeptide-like helical
Genome locationchr07:21420612..21421001
RNA-Seq ExpressionIVF0016246
SyntenyIVF0016246
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044707.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]5.17e-7799.15Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGA RILGIFYSLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM

Query:  NSVRIIVRTILGFLMVMT
        NSVRIIVRTILGFLMVMT
Subjt:  NSVRIIVRTILGFLMVMT

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]6.85e-4568.46Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG
        MSVSLEALAMAGI SNEW MDA+EWERNEI+  VPPHLLADE+DD+D   VTST+SNY F V G F   RR D  A       GI  SLSK +EKRASNG
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG

Query:  MNSVRIIVRTILGFLMVMTMKIISAQRSKM
        M+SVRIIVRTILGFL+V  +KIISA  S M
Subjt:  MNSVRIIVRTILGFLMVMTMKIISAQRSKM

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]3.40e-4568.46Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG
        MSVSLEALAMAGI SNEW MDA+EWERNEI+  VPPHLLADE+DD+D   VTST+SNY F V G F    R D  AD      GI  SLSK +EKRASNG
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG

Query:  MNSVRIIVRTILGFLMVMTMKIISAQRSKM
        M+SVRIIVRTILGFL+V  +KIISA  S M
Subjt:  MNSVRIIVRTILGFLMVMTMKIISAQRSKM

TYK16880.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa]2.66e-85100Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM

Query:  NSVRIIVRTILGFLMVMTMKIISAQRSKM
        NSVRIIVRTILGFLMVMTMKIISAQRSKM
Subjt:  NSVRIIVRTILGFLMVMTMKIISAQRSKM

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]1.49e-2750.39Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  +PPHLLADE+D+ED E  T   +  C           R+D    G      I + L K+ EKR  N 
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG

Query:  MNSVRIIVRTILGFLMVMTMKIISAQRSK
        ++S+ I+   ++GFLM MT+KII+++RSK
Subjt:  MNSVRIIVRTILGFLMVMTMKIISAQRSK

TrEMBL top hitse value%identityAlignment
A0A0A0KWE7 Uncharacterized protein9.6e-5286.47Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGE--YVTSTISNYCFRVDGSFGGWRRRDWKADG--ALRILGIFYSLSKVIEKRA
        MSVSLEALAMAGIDSNEW MDA+EWERNEIDVVPPHLLADEEDDEDG+    TSTISNYCF VDGSF GWR RD KADG     ILGIF SLSKVIEKRA
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGE--YVTSTISNYCFRVDGSFGGWRRRDWKADG--ALRILGIFYSLSKVIEKRA

Query:  SNGMNSVRIIVRTILGFLMVMTMKIISAQRSKM
        SNGM+SVRIIVRTILGFLMVMTMKIISAQRSKM
Subjt:  SNGMNSVRIIVRTILGFLMVMTMKIISAQRSKM

A0A1Q3CWR7 Uncharacterized protein2.0e-0955.93Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVV-PPHLLADEEDDEDGEYVTSTISNYC
        MSVSLEALAMAG+D NEWG+D +EWER +++ + PPHLLA+EE+    +Y    +S +C
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVV-PPHLLADEEDDEDGEYVTSTISNYC

A0A5A7TS68 Tetratricopeptide-like helical4.8e-5999.15Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGA RILGIFYSLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM

Query:  NSVRIIVRTILGFLMVMT
        NSVRIIVRTILGFLMVMT
Subjt:  NSVRIIVRTILGFLMVMT

A0A5D3CZU0 Tetratricopeptide-like helical2.6e-65100Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
        MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGM

Query:  NSVRIIVRTILGFLMVMTMKIISAQRSKM
        NSVRIIVRTILGFLMVMTMKIISAQRSKM
Subjt:  NSVRIIVRTILGFLMVMTMKIISAQRSKM

A0A6J1FX98 uncharacterized protein LOC1114478803.0e-2150.39Show/hide
Query:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG
        MSVSLEALAMAGIDSNEW MDA+EWERNE++  +PPHLLADE+D+ED E  T   +  C           R+D    G      I + L K+ EKR  N 
Subjt:  MSVSLEALAMAGIDSNEWGMDAQEWERNEIDV-VPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNG

Query:  MNSVRIIVRTILGFLMVMTMKIISAQRSK
        ++S+ I+   ++GFLM MT+KII+++RSK
Subjt:  MNSVRIIVRTILGFLMVMTMKIISAQRSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein7.1e-0756.82Show/hide
Query:  LEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGE
        +EALAMAG+D  EWG+  +EWE  E  VVP HLLAD+  +E+ E
Subjt:  LEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGGTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTT
ATTAGCCGATGAAGAAGATGACGAGGATGGTGAATATGTAACGAGTACTATTAGTAACTATTGCTTTCGCGTTGATGGGTCCTTCGGGGGATGGCGTCGGAGAGATTGGA
AAGCTGATGGTGCCCTTCGCATTTTGGGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATAGTTAGAACTATT
TTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTGGAAGCTTTGGCAATGGCTGGGATTGATTCCAATGAGTGGGGTATGGACGCTCAAGAATGGGAAAGAAACGAGATCGACGTTGTTCCACCACATTT
ATTAGCCGATGAAGAAGATGACGAGGATGGTGAATATGTAACGAGTACTATTAGTAACTATTGCTTTCGCGTTGATGGGTCCTTCGGGGGATGGCGTCGGAGAGATTGGA
AAGCTGATGGTGCCCTTCGCATTTTGGGGATTTTTTATAGTCTAAGCAAAGTCATAGAGAAAAGGGCTTCTAATGGGATGAATTCAGTGAGAATAATAGTTAGAACTATT
TTAGGGTTTTTGATGGTGATGACCATGAAGATAATTAGTGCACAAAGATCCAAGATGTAG
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSNEWGMDAQEWERNEIDVVPPHLLADEEDDEDGEYVTSTISNYCFRVDGSFGGWRRRDWKADGALRILGIFYSLSKVIEKRASNGMNSVRIIVRTI
LGFLMVMTMKIISAQRSKM