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IVF0016284 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016284
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr11:1050150..1050308
RNA-Seq ExpressionIVF0016284
SyntenyIVF0016284
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051366.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.11e-0869.39Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV
        M SG SSGVR A DA F SS M S VMGDPD ISD SR   GV GSPDV
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV

KAA0054912.1 uncharacterized protein E6C27_scaffold43052G00400 [Cucumis melo var. makuwa]3.45e-0560.98Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVS
        +TSG SS VRG PD I GSS+M SGV+ DPD  SD S M +
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVS

TYK16327.1 uncharacterized protein E5676_scaffold21G001080 [Cucumis melo var. makuwa]4.99e-0668.29Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVS
        M S +S  VRGAPDAIFGSS+M  GVM +PDVISD S M S
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVS

TYK23854.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.89e-0869.39Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV
        M SG SSGVR A DA F SS M S VMGDPD ISD SR   GV GSPDV
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV

TrEMBL top hitse value%identityAlignment
A0A5A7UAZ2 CACTA en-spm transposon protein9.4e-0669.39Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV
        M SG SSGVR A DA F SS M S VMGDPD ISD SR   GV GSPDV
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV

A0A5D3DJN9 CACTA en-spm transposon protein9.4e-0669.39Show/hide
Query:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV
        M SG SSGVR A DA F SS M S VMGDPD ISD SR   GV GSPDV
Subjt:  MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTCGGGAATATCGTCGGGAGTAAGGGGAGCCCCTGACGCTATTTTTGGTTCATCGAAAATGACATCGGGAGTAATGGGAGATCCCGACGTCATTAGTGATTTGTC
GAGAATGGTGTCGGGAGTAACGGGATCTCCCGACGTTCCGCTAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGTCGGGAATATCGTCGGGAGTAAGGGGAGCCCCTGACGCTATTTTTGGTTCATCGAAAATGACATCGGGAGTAATGGGAGATCCCGACGTCATTAGTGATTTGTC
GAGAATGGTGTCGGGAGTAACGGGATCTCCCGACGTTCCGCTAGACTAG
Protein sequenceShow/hide protein sequence
MTSGISSGVRGAPDAIFGSSKMTSGVMGDPDVISDLSRMVSGVTGSPDVPLD