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IVF0016303 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016303
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome b6-f complex subunit 4
Genome locationchr09:4186265..4186588
RNA-Seq ExpressionIVF0016303
SyntenyIVF0016303
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
GO:0045158 - electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity (molecular function)
InterPro domainsIPR005798 - Cytochrome b/b6, C-terminal
IPR005870 - Cytochrome b6/f complex, subunit IV
IPR036150 - Cytochrome b/b6, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QGU84438.1 cytochrome b6/f complex subunit IV [Casearia decandra]8.43e-4777.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSIFK
Subjt:  KIDSIFK

QIT04164.1 cytochrome b6/f subunit IV [Sechium edule]4.58e-4778.5Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        KIDSI K
Subjt:  KIDSIFK

WP_206639772.1 cytochrome b6-f complex subunit IV, partial [Vibrio vulnificus]8.25e-4776.64Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSI K
Subjt:  KIDSIFK

YP_009133083.1 PetD [Quercus aquifolioides]3.23e-4777.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL +F
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        KIDSI K
Subjt:  KIDSIFK

YP_009760318.1 cytochrome b6/f complex subunit IV [Garcinia gummi-gutta]8.56e-4777.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LWFGIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSI K
Subjt:  KIDSIFK

TrEMBL top hitse value%identityAlignment
A0A0E3XDJ9 Cytochrome b6-f complex subunit 48.0e-3677.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL +F
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        KIDSI K
Subjt:  KIDSIFK

A0A291B5P1 Cytochrome b6-f complex subunit 41.8e-3578.5Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TTIFLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSI K
Subjt:  KIDSIFK

A0A650FD52 Cytochrome b6-f complex subunit 41.0e-3577.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSIFK
Subjt:  KIDSIFK

A0A6G9KX30 Cytochrome b6-f complex subunit 41.4e-3577.57Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LWFGIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        +IDSI K
Subjt:  KIDSIFK

A0A6H0ER51 Cytochrome b6-f complex subunit 41.0e-3578.5Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        KIDSI K
Subjt:  KIDSIFK

SwissProt top hitse value%identityAlignment
Q06GW6 Cytochrome b6-f complex subunit 41.6e-3677.67Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KID
        +ID
Subjt:  KID

Q14FC6 Cytochrome b6-f complex subunit 45.4e-3777.14Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG  V LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSI
        +IDSI
Subjt:  KIDSI

Q3BAK6 Cytochrome b6-f complex subunit 43.5e-3676.7Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP+GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPI+KSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KID
        +ID
Subjt:  KID

Q6EW21 Cytochrome b6-f complex subunit 47.7e-3677.45Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KI
        +I
Subjt:  KI

Q7YJU7 Cytochrome b6-f complex subunit 49.1e-3774.77Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG AV LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

Query:  KIDSIFK
        ++D   K
Subjt:  KIDSIFK

Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal6.1e-0437.7Show/hide
Query:  PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFR
        PA P +TP  I+ +WYF P+  ILR +P K   V  +  V + LL + F K +    + FR
Subjt:  PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFR

ATCG00730.1 photosynthetic electron transfer D7.9e-3677Show/hide
Query:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF
        MIGEPA PFATPLEIL +WYFFPVFQILR VP K   VLLMV VP GLLTV FL++VNKFQN FRR + TT+FLIG A  LW GIGATLPIDKSLTL LF
Subjt:  MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLF

ATMG00220.1 apocytochrome b6.1e-0437.7Show/hide
Query:  PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFR
        PA P +TP  I+ +WYF P+  ILR +P K   V  +  V + LL + F K +    + FR
Subjt:  PAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGAGCCTGCATATCCATTTGCAACTCCTTTGGAAATATTGTTGAAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTATAGTGCCAAAGAAGTTCTCGAG
TGTTCTTTTAATGGTTTTTGTACCGGTGGGATTATTAACTGTATCATTTTTAAAGGATGTCAATAAATTCCAAAATCTATTTCGTCGTCTAATAGTGACAACCATCTTTT
TGATTGGTATCGCAGTAACCCTTTGGTTTGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGATCTTTTTAAAATTGATTCAATTTTTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGAGCCTGCATATCCATTTGCAACTCCTTTGGAAATATTGTTGAAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTATAGTGCCAAAGAAGTTCTCGAG
TGTTCTTTTAATGGTTTTTGTACCGGTGGGATTATTAACTGTATCATTTTTAAAGGATGTCAATAAATTCCAAAATCTATTTCGTCGTCTAATAGTGACAACCATCTTTT
TGATTGGTATCGCAGTAACCCTTTGGTTTGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGATCTTTTTAAAATTGATTCAATTTTTAAATAA
Protein sequenceShow/hide protein sequence
MIGEPAYPFATPLEILLKWYFFPVFQILRIVPKKFSSVLLMVFVPVGLLTVSFLKDVNKFQNLFRRLIVTTIFLIGIAVTLWFGIGATLPIDKSLTLDLFKIDSIFK