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IVF0016307 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016307
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr08:20687131..20687505
RNA-Seq ExpressionIVF0016307
SyntenyIVF0016307
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]2.79e-5377.42Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+AR RTNSTSSKG+ PSSSSNS  SP+S  QY MDLGFT VTRSRSR   I IGSPT+SSTPP PS NLI PSGGV+QMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+TLDKRFV  P+IK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.70e-5177.42Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSS+KGNAR RTNSTSSKGN  SSSSNSA SP+S DQYAMDLGFT VTRSRSR   I IG PT+SSTPP PSANLI P G VVQM+PP  PSSNR+SSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  PKIK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]1.09e-5983.87Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+AR RTNSTSSKGNHPSSSSNSASSP++ DQYAMDL FTTVTRSRSRS  IR GSPT+SSTPP P ANLI PSGGVVQMRPPT PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  PKIK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]2.30e-5377.42Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSS+KG+AR RTNSTSSKGNH SSSSNSA SP   DQYAM++GFTTVTRSRSRS +IRIGS T+S+TPP PS NLIHPS GVVQMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
         T YSQA+T DKRFV  P+IK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]4.70e-5479.03Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+ R RTNSTSSKGN PSSSSNSA SP+S DQY MDLGFTTV RSRSRS  IR  SPT+SSTPP P ANLI PSG VVQMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  PKIK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.9e-4179.84Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSS+KG+AR RTNSTSSKGN P SSSNSA SPLS DQYAMDLGFTTVTR  SRSF I IGSPT+SSTPP PS NLI PS GVVQMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  P+IK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

A0A5A7URC1 Uncharacterized protein8.4e-4583.87Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+AR RTNSTSSKGNHPSSSSNSASSP++ DQYAMDL FTTVTRSRSRS  IR GSPT+SSTPP P ANLI PSGGVVQMRPPT PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  PKIK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

A0A5D3BPD3 Uncharacterized protein2.1e-4077.42Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSS+KG+AR RTNSTSSKGNH SSSSNSA SP   DQYAM++GFTTVTRSRSRS +IRIGS T+S+TPP PS NLIHPS GVVQMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
         T YSQA+T DKRFV  P+IK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

A0A5D3CKX1 Uncharacterized protein1.6e-4079.03Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+ R RTNSTSSKGN PSSSSNSA SP+S DQY MDLGFTTV RSRSRS  IR  SPT+SSTPP P ANLI PSG VVQMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+T DKRFV  PKIK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

E5GCE6 Uncharacterized protein2.8e-4077.42Show/hide
Query:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP
        MSSEKG+AR RTNSTSSKG+ PSSSSNS  SP+S  QY MDLGFT VTRSRSR   I IGSPT+SSTPP PS NLI PSGGV+QMRPP  PSSNRESSTP
Subjt:  MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTP

Query:  PTNYSQAITLDKRFVSSPKIKCYF
        PT YSQA+TLDKRFV  P+IK YF
Subjt:  PTNYSQAITLDKRFVSSPKIKCYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCAGAAAAGGGAAATGCTAGAGAAAGAACAAACTCTACCTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCATCCTCACCTCTGAGTGTAGATCA
ATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCTAGATCAAGATCGTTCGACATACGGATTGGGTCTCCCACGAAGTCATCAACTCCACCTATTCCTTCGGCCA
ATCTTATCCATCCTTCTGGCGGAGTCGTTCAAATGAGGCCTCCTACCTTTCCTTCATCCAATAGGGAGTCTTCTACTCCACCTACAAATTATTCTCAGGCTATCACCCTC
GATAAACGGTTTGTGTCAAGCCCCAAGATCAAATGTTATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCAGAAAAGGGAAATGCTAGAGAAAGAACAAACTCTACCTCTTCAAAGGGCAATCACCCATCTTCTTCTTCTAATTCTGCATCCTCACCTCTGAGTGTAGATCA
ATATGCAATGGATTTAGGGTTTACCACAGTAACCCGATCTAGATCAAGATCGTTCGACATACGGATTGGGTCTCCCACGAAGTCATCAACTCCACCTATTCCTTCGGCCA
ATCTTATCCATCCTTCTGGCGGAGTCGTTCAAATGAGGCCTCCTACCTTTCCTTCATCCAATAGGGAGTCTTCTACTCCACCTACAAATTATTCTCAGGCTATCACCCTC
GATAAACGGTTTGTGTCAAGCCCCAAGATCAAATGTTATTTTTAA
Protein sequenceShow/hide protein sequence
MSSEKGNARERTNSTSSKGNHPSSSSNSASSPLSVDQYAMDLGFTTVTRSRSRSFDIRIGSPTKSSTPPIPSANLIHPSGGVVQMRPPTFPSSNRESSTPPTNYSQAITL
DKRFVSSPKIKCYF