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IVF0016321 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016321
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr01:22038698..22038907
RNA-Seq ExpressionIVF0016321
SyntenyIVF0016321
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042175.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.99e-3298.41Show/hide
Query:  MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGGS
        MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGG+
Subjt:  MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGGS
TrEMBL top hitse value%identityAlignment
A0A5A7TL62 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.4e-2592.75Show/hide
Query:  MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGGSVDILEE
        MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGG+   +EE
Subjt:  MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGGSVDILEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCACGTTGTGACTGGAGTGCGTCGTGGCGGACACACAAAAGGGAGAAGCAAGAACGTCGATGTACAGTTGTCGTCCGATGAGTCAAGCGACGCACGGGGTTTATT
GGGTGATGGCGTTGGCTGGAGGAGAGAAAGAGATGAAGAGATTGTTGTCGAACAAGAAATTTCAACCGAAGGGGGGTCGGTCGACATTCTAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCACGTTGTGACTGGAGTGCGTCGTGGCGGACACACAAAAGGGAGAAGCAAGAACGTCGATGTACAGTTGTCGTCCGATGAGTCAAGCGACGCACGGGGTTTATT
GGGTGATGGCGTTGGCTGGAGGAGAGAAAGAGATGAAGAGATTGTTGTCGAACAAGAAATTTCAACCGAAGGGGGGTCGGTCGACATTCTAGAAGAATGA
Protein sequenceShow/hide protein sequence
MSHVVTGVRRGGHTKGRSKNVDVQLSSDESSDARGLLGDGVGWRRERDEEIVVEQEISTEGGSVDILEE