CuGenDBv2

Gene ID	IVF0016329
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA binding protein
Genome location	tig00000430:144103..144792
RNA-Seq Expression	IVF0016329
Synteny	IVF0016329
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADN34038.1 DNA binding protein [Cucumis melo subsp. melo]

1.02e-153

100

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKE
        NGDAVASERNVEEEEYKLHEKE
Subjt:  NGDAVASERNVEEEEYKLHEKE

KAA0052154.1 DNA binding protein [Cucumis melo var. makuwa]

1.80e-159

100

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKEVTAIFDL
        NGDAVASERNVEEEEYKLHEKEVTAIFDL
Subjt:  NGDAVASERNVEEEEYKLHEKEVTAIFDL

KAE8650412.1 hypothetical protein Csa_010702 [Cucumis sativus]

3.06e-149

95.22

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Query:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVASERNVEEEEYKLHEKEVTAIFDL
        SNGDAV SER VEEEEYKL EK+VTAIFDL
Subjt:  SNGDAVASERNVEEEEYKLHEKEVTAIFDL

XP_004147629.1 uncharacterized protein LOC101204799 [Cucumis sativus]

1.83e-143

95.07

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Query:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVASERNVEEEEYKLHEKE
        SNGDAV SER VEEEEYKL EK+
Subjt:  SNGDAVASERNVEEEEYKLHEKE

XP_016899011.1 PREDICTED: uncharacterized protein LOC103483924 [Cucumis melo]

3.39e-155

97.81

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKEVTAIFD
        NGDAVASERNVEEEEYKLHEKE   +F+
Subjt:  NGDAVASERNVEEEEYKLHEKEVTAIFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5G4 Uncharacterized protein

4.4e-116

95.22

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Query:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP
        MNRQ  NHLQ+NSISHCQ+CGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC+RCPSISHLSCVSFRFSSTFLCP
Subjt:  MNRQ-LNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDPRFVFFDGFDSG SL QSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
Subjt:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVASERNVEEEEYKLHEKEVTAIFDL
        SNGDAV SER VEEEEYKL EK+VTAIFDL
Subjt:  SNGDAVASERNVEEEEYKLHEKEVTAIFDL

A0A1S4DSP5 uncharacterized protein LOC103483924

1.0e-120

97.81

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKEVTAIFD
        NGDAVASERNVEEEEYKLHEKE   +F+
Subjt:  NGDAVASERNVEEEEYKLHEKEVTAIFD

A0A5A7U9X0 DNA binding protein

7.5e-124

100

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKEVTAIFDL
        NGDAVASERNVEEEEYKLHEKEVTAIFDL
Subjt:  NGDAVASERNVEEEEYKLHEKEVTAIFDL

A0A6J1IXP5 uncharacterized protein LOC111479468

2.5e-87

76.86

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Query:  MNR-QLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP
        MNR   NHLQ+NSIS+C ECGISQS CWILHNVR KA+FRRLCTNCVLK+NLSRFCPLCFD+Y+DSTPP SH RVMC+RCPSISH+SC SFRFSSTFLCP
Subjt:  MNR-QLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCP

Query:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK
        LCSDP F FFDGFDSG SLRQSE  V+ LAG+  D KS KAIVAAARV AQSMRRAA DARAVAEMK +NA FAKKQATLALE+LAYLVLQEKD+NGY+K
Subjt:  LCSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSK

Query:  SNGDAVASERNVEEEEYKLHEKEVTAIFD
        +NG+A A     EEEE +L  + VTAI +
Subjt:  SNGDAVASERNVEEEEYKLHEKEVTAIFD

E5GC39 DNA binding protein

6.6e-120

100

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Query:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
        MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL
Subjt:  MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPL

Query:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
        CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS
Subjt:  CSDPRFVFFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKS

Query:  NGDAVASERNVEEEEYKLHEKE
        NGDAVASERNVEEEEYKLHEKE
Subjt:  NGDAVASERNVEEEEYKLHEKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G09520.1 LOCATED IN: chloroplast

7.4e-23

35.64

Show/hide

Query:  NSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC--YRCPSISHLSCVSFRFSSTFLCPLCSDPR-FV
        NS   C +CG S +  W++H VR +A+ R  CT+C+L+++ + FCP CF +Y+ S  PPS  RV C    C S++H+ C       ++LCP C DP  F 
Subjt:  NSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMC--YRCPSISHLSCVSFRFSSTFLCPLCSDPR-FV

Query:  FFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKN
        FF               V     + VD    +A + AA+++A SM +A + A+   + + K AA AKK+A  ALEQ+  L  +EK ++
Subjt:  FFDGFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKN

AT3G17460.1 PHD finger family protein

6.7e-16

32.62

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Query:  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFS--------------STFLCPLCSDPRFVFFDGFDS
        +H V     FRRLCT+C+LK     FC +CF++++++ PP +  R++C  CPS +HLSC +   S              S+F C  CS+P F FF    S
Subjt:  LHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFS--------------STFLCPLCSDPRFVFFDGFDS

Query:  GVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSN
         V+    + T        +  KS  A+VAA  +S  +M +A    +  A  KI  A  AK +A  AL  L  +V+++    G  K +
Subjt:  GVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATCGCCAACTCAACCATCTTCAGACCAACTCCATTTCTCACTGCCAAGAGTGCGGCATCTCTCAATCCGCCTGTTGGATCCTCCACAATGTTCGTCACAAAGCCAC
CTTCCGTCGTCTCTGCACTAATTGTGTCCTCAAGCACAATCTCTCCCGTTTTTGTCCTCTTTGCTTCGATGTTTATGAGGATTCAACTCCTCCGCCGTCTCATCACCGAG
TTATGTGCTACAGATGTCCTTCAATCTCTCATCTCTCTTGCGTTTCCTTTCGATTTTCCTCTACCTTCCTATGCCCTCTCTGCTCCGATCCTCGTTTTGTCTTCTTCGAT
GGTTTTGACTCCGGCGTCAGCCTTCGTCAATCGGAGTCTACTGTCGCCTTTTTAGCCGGGAAAAATGTTGATGCTAAATCAGGGAAAGCTATTGTCGCTGCGGCTCGTGT
GTCCGCTCAATCCATGAGGAGAGCAGCTCTTGACGCTAGGGCTGTTGCGGAGATGAAGATAAAGAACGCCGCGTTTGCGAAGAAACAAGCTACTCTCGCATTGGAACAGC
TTGCGTATCTTGTTCTTCAGGAGAAGGATAAGAATGGATATTCTAAAAGTAATGGAGATGCTGTTGCTAGTGAGAGGAATGTTGAAGAAGAAGAATACAAGCTACATGAG
AAAGAGGTAACCGCCATTTTCGATCTATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MNRQLNHLQTNSISHCQECGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDSTPPPSHHRVMCYRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFD
GFDSGVSLRQSESTVAFLAGKNVDAKSGKAIVAAARVSAQSMRRAALDARAVAEMKIKNAAFAKKQATLALEQLAYLVLQEKDKNGYSKSNGDAVASERNVEEEEYKLHE
KEVTAIFDL

IVF0016329 (gene) of Melon (IVF77) v1 genome