; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016341 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016341
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr07:4818664..4820084
RNA-Seq ExpressionIVF0016341
SyntenyIVF0016341
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032918.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]0.096.41Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
        FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

KAA0040832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]6.04e-29087.53Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQRP N+RQP  N+QN++  +PPQSVA+SSGTTPSRK+ P+QSSAPSPMSAENYAMDLQFEQVSRRRQGSA+RTLTIQSDSSSLPPIP TALL 
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPT PNKRAASP ASSSRSAIPRNPSSYSQIVRP IFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVC+QIFPHGFNFL EDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSA+ITHVPDK DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIF VEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQL  SGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAV+STLAGASTQQE NSVVNNVVVNLSDDNDDL EDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

KAA0050443.1 polyprotein [Cucumis melo var. makuwa]4.06e-28886.89Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQ P N+RQ P +NQNNS  +PPQ++ SSS TTPS+ +  +QSSAPS MSAENYAMDLQFEQVSRR QGSA+RTLTIQSDSSSLPPIPSTALLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASP ASSSRSAIPRNPSSYSQIVRPK+FQPRP INGYFTKTTMVDLTIEPEFDGPSV EVC+QIFPH FNFLPEDL+KT TFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQLGPS NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAVMSTLAGASTQQEFN VVNNVVVN SDDNDDLPEDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

TYK17808.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.65e-29187.74Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQRP N+RQP  N+QN++  +PPQSVA+SSGTTPSRK+ P+QSSAPSPMSAENYAMDLQFEQVSRRRQGSA+RTLTIQSDSSSLPPIP TALL 
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPT PNKRAASP ASSSRSAIPRNPSSYSQIVRP IFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVC+QIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSA+ITHVPDK DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIF VEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQL  SGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAV+STLAGASTQQE NSVVNNVVVNLSDDNDDL EDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

TYK28082.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]0.096.19Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPST LLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
        FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

TrEMBL top hitse value%identityAlignment
A0A5A7SQU5 Retrotransposable element Tf23.9e-25796.41Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
        FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

A0A5A7TBK1 Retrotransposable element Tf22.0e-22987.53Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQRP N+RQP  N+QN++  +PPQSVA+SSGTTPSRK+ P+QSSAPSPMSAENYAMDLQFEQVSRRRQGSA+RTLTIQSDSSSLPPIP TALL 
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPT PNKRAASP ASSSRSAIPRNPSSYSQIVRP IFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVC+QIFPHGFNFL EDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSA+ITHVPDK DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIF VEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQL  SGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAV+STLAGASTQQE NSVVNNVVVNLSDDNDDL EDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

A0A5A7U3G5 Polyprotein5.0e-22886.89Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQ P N+RQ P +NQNNS  +PPQ++ SSS TTPS+ +  +QSSAPS MSAENYAMDLQFEQVSRR QGSA+RTLTIQSDSSSLPPIPSTALLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASP ASSSRSAIPRNPSSYSQIVRPK+FQPRP INGYFTKTTMVDLTIEPEFDGPSV EVC+QIFPH FNFLPEDL+KT TFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQLGPS NFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAVMSTLAGASTQQEFN VVNNVVVN SDDNDDLPEDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

A0A5D3D2Q6 Retrotransposable element Tf22.4e-23087.74Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPP RQRP N+RQP  N+QN++  +PPQSVA+SSGTTPSRK+ P+QSSAPSPMSAENYAMDLQFEQVSRRRQGSA+RTLTIQSDSSSLPPIP TALL 
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPT PNKRAASP ASSSRSAIPRNPSSYSQIVRP IFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVC+QIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSA+ITHVPDK DPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSH FK PSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIF VEVQRSYH FQQSIYSSPLSKTFRFALYF+I WIFCWNFQL  SGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
         LTKNAV+STLAGASTQQE NSVVNNVVVNLSDDNDDL EDAS  S+NDVDDLDYDPY+GLDINDPFL TQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

A0A5D3DX32 Retrotransposable element Tf21.5e-25696.19Show/hide
Query:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR
        MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPST LLR
Subjt:  MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLR

Query:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
        PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD
Subjt:  PSGPTTPNKRAASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVD

Query:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG
        SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI                 QAYKMHFPNWFQNWWMYFG
Subjt:  SKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYI-----------------QAYKMHFPNWFQNWWMYFG

Query:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
        LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF
Subjt:  LSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQLGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAF

Query:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
        FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY
Subjt:  FLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDPYDGLDINDPFLVTQPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCACCTCCTGACCGGCAACGGCCACCGAACGAGCGGCAACCGCCGCCAAACAATCAAAATAATAGCTCATTGAAACCACCTCAATCAGTAGCTTCCTCCTCAGG
AACTACTCCTTCCAGAAAGGAATTCCCAAGTCAATCATCTGCACCGTCACCTATGAGTGCAGAAAACTACGCCATGGACTTGCAGTTCGAGCAAGTTTCCAGGCGACGAC
AAGGTTCTGCTAAAAGAACTTTGACCATTCAATCAGACTCTTCGAGTCTTCCCCCTATTCCTTCAACCGCATTGTTGCGTCCCTCTGGACCAACAACTCCAAATAAGCGT
GCCGCTTCCCCGGGCGCTTCTTCCTCAAGGTCTGCAATACCGAGGAATCCTTCCTCGTATTCTCAAATCGTCAGGCCCAAGATTTTCCAGCCAAGACCTCCAATTAATGG
TTATTTCACTAAAACCACAATGGTTGATTTAACTATAGAACCAGAATTCGATGGACCTTCTGTCCAAGAAGTCTGTAGTCAAATATTCCCTCATGGGTTCAATTTCTTGC
CCGAGGATCTTTCAAAAACCAGGACTTTCTACGAGTACATTTTAGTTGACTCCAAATCAGCTGAAATTACTCATGTCCCAGATAAAAATGATCCCTCCAAGATCATTTAT
TCAAAGTTGAGAATTTTTCGTGTTCTCACTCCATCTTACTGGAAACAGGGGATGTTTGTGGGAAGAAAATTCTCTCACTCTTTCAAACAACCCTCATACAATTACCGTGA
CTATACAAAGGCATGGTATATTCAAGCTTACAAAATGCACTTCCCAAACTGGTTTCAAAATTGGTGGATGTATTTTGGACTCTCTGAGGAAATATTTCCTGTAGAAGTTC
AACGTTCGTACCACTTTTTTCAACAAAGTATCTATTCGTCGCCTCTTTCAAAGACGTTTAGGTTTGCTTTGTATTTCAAAATTTCCTGGATCTTTTGCTGGAATTTCCAG
CTAGGACCTTCAGGAAACTTCAAAGCCTTGAGTAAATCCCTCAGGATCAAATGGTGGGAAAAGTTCAATTACTCCCATCTTGAAGTCAACAAGATCAAGGATTGGTTTAA
AGCCAATATCCATCTCCAAGATATGACTAGGCAAGAGGACGAAGCCTTCTTCCTCACCAAAAACGCAGTCATGTCAACCCTTGCCGGAGCAAGCACTCAACAGGAGTTCA
ATTCTGTTGTCAATAACGTTGTTGTAAACCTTTCAGACGATAACGACGATTTACCAGAGGACGCTTCCCTAGGCTCCATTAATGATGTCGATGATCTTGACTATGACCCA
TACGATGGCCTCGACATCAACGACCCATTTTTGGTCACACAACCGTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCACCTCCTGACCGGCAACGGCCACCGAACGAGCGGCAACCGCCGCCAAACAATCAAAATAATAGCTCATTGAAACCACCTCAATCAGTAGCTTCCTCCTCAGG
AACTACTCCTTCCAGAAAGGAATTCCCAAGTCAATCATCTGCACCGTCACCTATGAGTGCAGAAAACTACGCCATGGACTTGCAGTTCGAGCAAGTTTCCAGGCGACGAC
AAGGTTCTGCTAAAAGAACTTTGACCATTCAATCAGACTCTTCGAGTCTTCCCCCTATTCCTTCAACCGCATTGTTGCGTCCCTCTGGACCAACAACTCCAAATAAGCGT
GCCGCTTCCCCGGGCGCTTCTTCCTCAAGGTCTGCAATACCGAGGAATCCTTCCTCGTATTCTCAAATCGTCAGGCCCAAGATTTTCCAGCCAAGACCTCCAATTAATGG
TTATTTCACTAAAACCACAATGGTTGATTTAACTATAGAACCAGAATTCGATGGACCTTCTGTCCAAGAAGTCTGTAGTCAAATATTCCCTCATGGGTTCAATTTCTTGC
CCGAGGATCTTTCAAAAACCAGGACTTTCTACGAGTACATTTTAGTTGACTCCAAATCAGCTGAAATTACTCATGTCCCAGATAAAAATGATCCCTCCAAGATCATTTAT
TCAAAGTTGAGAATTTTTCGTGTTCTCACTCCATCTTACTGGAAACAGGGGATGTTTGTGGGAAGAAAATTCTCTCACTCTTTCAAACAACCCTCATACAATTACCGTGA
CTATACAAAGGCATGGTATATTCAAGCTTACAAAATGCACTTCCCAAACTGGTTTCAAAATTGGTGGATGTATTTTGGACTCTCTGAGGAAATATTTCCTGTAGAAGTTC
AACGTTCGTACCACTTTTTTCAACAAAGTATCTATTCGTCGCCTCTTTCAAAGACGTTTAGGTTTGCTTTGTATTTCAAAATTTCCTGGATCTTTTGCTGGAATTTCCAG
CTAGGACCTTCAGGAAACTTCAAAGCCTTGAGTAAATCCCTCAGGATCAAATGGTGGGAAAAGTTCAATTACTCCCATCTTGAAGTCAACAAGATCAAGGATTGGTTTAA
AGCCAATATCCATCTCCAAGATATGACTAGGCAAGAGGACGAAGCCTTCTTCCTCACCAAAAACGCAGTCATGTCAACCCTTGCCGGAGCAAGCACTCAACAGGAGTTCA
ATTCTGTTGTCAATAACGTTGTTGTAAACCTTTCAGACGATAACGACGATTTACCAGAGGACGCTTCCCTAGGCTCCATTAATGATGTCGATGATCTTGACTATGACCCA
TACGATGGCCTCGACATCAACGACCCATTTTTGGTCACACAACCGTATTAG
Protein sequenceShow/hide protein sequence
MEPPPDRQRPPNERQPPPNNQNNSSLKPPQSVASSSGTTPSRKEFPSQSSAPSPMSAENYAMDLQFEQVSRRRQGSAKRTLTIQSDSSSLPPIPSTALLRPSGPTTPNKR
AASPGASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCSQIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIY
SKLRIFRVLTPSYWKQGMFVGRKFSHSFKQPSYNYRDYTKAWYIQAYKMHFPNWFQNWWMYFGLSEEIFPVEVQRSYHFFQQSIYSSPLSKTFRFALYFKISWIFCWNFQ
LGPSGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFFLTKNAVMSTLAGASTQQEFNSVVNNVVVNLSDDNDDLPEDASLGSINDVDDLDYDP
YDGLDINDPFLVTQPY