; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016350 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016350
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptiondouble-stranded RNA-binding protein 1-like
Genome locationchr03:24615322..24618345
RNA-Seq ExpressionIVF0016350
SyntenyIVF0016350
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0009735 - response to cytokinin (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010589 - leaf proximal/distal pattern formation (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0031054 - pre-miRNA processing (biological process)
GO:0035279 - mRNA cleavage involved in gene silencing by miRNA (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0010445 - nuclear dicing body (cellular component)
GO:0042802 - identical protein binding (molecular function)
GO:0035198 - miRNA binding (molecular function)
GO:0004525 - ribonuclease III activity (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
InterPro domainsIPR044450 - AtDRB-like, first double-stranded RNA binding domain, plant
IPR031147 - Double-stranded RNA-binding protein
IPR014720 - Double-stranded RNA-binding domain
IPR011907 - Ribonuclease III


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065099.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]2.55e-18198.11Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTVIPSCKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        VTPKSTAAPRAKKGRFKRGV RKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

XP_008444916.1 PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]1.90e-185100Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV

Query:  TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

XP_008444917.1 PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo]6.30e-17899.22Show/hide
Query:  QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ
        + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ
Subjt:  QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ

Query:  EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA
        EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA
Subjt:  EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA

Query:  PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

XP_011649689.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus]1.51e-16992.51Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTVIPSCKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKR---GVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        V PKSTA+PRAKKGRFKR   GV R R F NGLVNLDF+N DRS LEPFTT  VQLPGY GPVDLAK
Subjt:  VTPKSTAAPRAKKGRFKR---GVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

XP_011649690.1 double-stranded RNA-binding protein 1 isoform X2 [Cucumis sativus]2.67e-17092.51Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTVIPSCKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKR---GVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        V PKSTA+PRAKKGRFKR   GV R R F NGLVNLDF+N DRS LEPFTT  VQLPGY GPVDLAK
Subjt:  VTPKSTAAPRAKKGRFKR---GVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

TrEMBL top hitse value%identityAlignment
A0A0A0LRU8 Uncharacterized protein3.7e-13392.51Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTVIPSCKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        V PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N DRS LEPFTT  VQLPGY GPVDLAK
Subjt:  VTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

A0A1S3BBH0 double-stranded RNA-binding protein 1 isoform X13.2e-145100Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSV

Query:  TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  TPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

A0A1S3BBH3 double-stranded RNA-binding protein 1 isoform X22.6e-13999.22Show/hide
Query:  QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ
        + VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ
Subjt:  QGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQ

Query:  EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA
        EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA
Subjt:  EYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAA

Query:  PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  PRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

A0A5A7VI00 Double-stranded RNA-binding protein 1 isoform X14.3e-14298.11Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRY+SLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTVIPSCKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
        VTPKSTAAPRAKKGRFKRGV RKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK
Subjt:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAK

A0A6J1HEW7 double-stranded RNA-binding protein 1-like2.7e-11281.51Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        MPAKD+FQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTF+STVIV DVRY+SLPGFSNRKAAEQSAAEVALMELSKS+DLNPHVS PVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMNFAIPLYQC+KDD  GR  LFSCTVEIGGIRYIGA AKTKKEAEIKAARTALLAIQSCP SL   S+N +QLTVIP CKRKEAADCS
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQ-LPGYAGPVDLAK
        V PK+  APR KKGRFK+  S+K+G RNGL NL+F N DRS+ EP  T  V  +PG    V+LAK
Subjt:  VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQ-LPGYAGPVDLAK

SwissProt top hitse value%identityAlignment
O04492 Double-stranded RNA-binding protein 19.4e-7065.6Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRYNSLPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMN+AIPLYQCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  + N QLTV+P C++K      
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKR
           ++    +A+K +FK+
Subjt:  VTPKSTAAPRAKKGRFKR

Q0DJA3 Double-stranded RNA-binding protein 31.4e-5760.19Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  Y SLPGFSNRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY

Query:  AQKMNFAIPLYQCQKDDGPGRG-SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP
        AQKMN+AIP Y C K   P  G + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   +    P  T  P
Subjt:  AQKMNFAIPLYQCQKDDGPGRG-SLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP

Query:  -RAKKGRFKRGVSRKR
         +AKKG FK+  ++++
Subjt:  -RAKKGRFKRGVSRKR

Q0DKP4 Double-stranded RNA-binding protein 21.0e-2339.87Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   + S    S  + AE +AAEVAL ELSK    +   ++ + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN

Query:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   +  GPG   +F+CTVE+ G+ + G   KTKK+A+  AA  A   ++  P
Subjt:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

Q0IQN6 Double-stranded RNA-binding protein 84.5e-5658.6Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  Y+SLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY

Query:  AQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP-
        AQKMN+AIP Y C K       + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   +    P  T  P 
Subjt:  AQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP-

Query:  RAKKGRFKRGVSRKR
        + KKG FK+  ++++
Subjt:  RAKKGRFKRGVSRKR

Q0IV63 Double-stranded RNA-binding protein 75.9e-5658.6Show/hide
Query:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY
        V NCYVFKSRLQEYAQK GL TP Y T KEGPSHEP F STV++N+  Y+SLPGF NRKAAEQSAAEVALME+ KS   N ++   V ETGLCKNLLQEY
Subjt:  VSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEY

Query:  AQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP-
        AQKMN+AIP Y C K       + F CTVEIGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   +    P  T  P 
Subjt:  AQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAP-

Query:  RAKKGRFKRGVSRKR
        + KKG FK+  ++++
Subjt:  RAKKGRFKRGVSRKR

Arabidopsis top hitse value%identityAlignment
AT1G09700.1 dsRNA-binding domain-like superfamily protein6.7e-7165.6Show/hide
Query:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG
        M + D   GVSNCYVFKSRLQEYAQK  LPTPVYE +KEGPSH+  F STVI++ VRYNSLPGF NRKAAEQSAAEVAL EL+KSS+L+  VSQPVHETG
Subjt:  MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETG

Query:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS
        LCKNLLQEYAQKMN+AIPLYQCQK +  GR + F+CTVEIGGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  + N QLTV+P C++K      
Subjt:  LCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS

Query:  VTPKSTAAPRAKKGRFKR
           ++    +A+K +FK+
Subjt:  VTPKSTAAPRAKKGRFKR

AT2G28380.1 dsRNA-binding protein 21.7e-2138.65Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F +TV  N   + S    S  + AE SAAEVAL  LS     +   ++ + ETG+ KNLLQE AQ++ 
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN

Query:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSA
          +P Y   +  G G   +F+ TVE+ GI + G  AK KK+AE  AA  A  +++      S+
Subjt:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSA

AT3G26932.1 dsRNA-binding protein 31.0e-2339.87Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V  N   + S    S  + AE SAAEVAL  LS         ++ + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN

Query:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   +  GPG    FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Subjt:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

AT3G26932.2 dsRNA-binding protein 31.0e-2339.87Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y   +EGP H P F ++V  N   + S    S  + AE SAAEVAL  LS         ++ + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN

Query:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP
          +P+Y   +  GPG    FSCTVE+ G+ + G  AKTKK+AE  AA  A  +++  P
Subjt:  FAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCP

AT5G41070.1 dsRNA-binding protein 53.2e-2039.22Show/hide
Query:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN
        ++K++LQE AQ+     P Y  I+EGP H P F ++V  N   + S    S  + AE +AAEV+L  LS         ++ + ETG+ KNLLQE A +  
Subjt:  VFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMN

Query:  FAIPLYQCQKDDG---PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA
          +P+Y   +      PG    FSCTVE+ G+ + G  AKTKK+AE  AA  A
Subjt:  FAIPLYQCQKDDG---PGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTAT
AAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATAATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAG
CTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCATGAAACAGGACTATGCAAAAATCTGCTTCAGGAGTATGCA
CAGAAGATGAACTTTGCAATCCCACTATATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCTTGTACTGTAGAAATTGGAGGGATCCGCTACATTGG
TGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTATCAATCTTCAGC
TCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTACACCGAAGTCCACTGCAGCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTCA
AGGAAGAGAGGCTTCAGAAATGGATTAGTCAATTTGGACTTTAACAACATTGATAGATCAGCCTTGGAACCTTTTACAACTGAGGCCGTCCAGTTGCCAGGGTATGCGGG
ACCTGTTGATTTAGCAAAGATACTTTGCCGAATTCCGAGTCTAGAACGACTGATCTAA
mRNA sequenceShow/hide mRNA sequence
CCATCACCTAGGCTTCGAACTTTGCAGCTCATTTTTTCGCGTCTACGAACGGAGTGGTTAGCCCAGCCGCACTAATTCCTCTCTGCTCTTCGCCTTTACTAATACTCAAA
TCTCCTGCTTAGAGAGGATTCTCACCTTTTTCTTCTCCTCAAAGCTATGCCAGCCAAGGACAACTTTCAAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGG
AATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATAAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATAT
AATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACC
CGTGCATGAAACAGGACTATGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTATATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGAT
CCCTTTTCTCTTGTACTGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATC
CAATCTTGCCCGAATTCATTGTCTGCAAAATCTATCAATCTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTACACCGAAGTCCAC
TGCAGCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTCAAGGAAGAGAGGCTTCAGAAATGGATTAGTCAATTTGGACTTTAACAACATTGATAGATCAGCCT
TGGAACCTTTTACAACTGAGGCCGTCCAGTTGCCAGGGTATGCGGGACCTGTTGATTTAGCAAAGATACTTTGCCGAATTCCGAGTCTAGAACGACTGATCTAAGCTCAA
GTAACAATGACGTTTTGGTCTCCAACGTCCAAAGTGACATGCCTCCGCACGTAAATAGTAATTTCGGAAATGGTTGTTCGGGTACTCTCAATTCCAATCAAGTAAACTGT
GCAACCTCTAACGTTATGAGTTTTCCTCTCACCGACGTTCAACCAACTTGTAGTGAAGTAGGGAATGTGGCTGCTGGAGTAACAGGGGAGCTTCAGTGATTGACAGTGCT
ATTAAGAGCTAGCTTTGTGTTTAAAGCCACTCCTACTTACTAAATCCGAACGGTGCAATGTGCTTAGCTTGGTTTTGCAGTTTGGGGCAAGTAGTAAAATTGAAGATTCT
TGAATAGCTTTACTATTAAAAAGCTTAAGAGGTTGAATTTATTGGACTGAAGATCTGAGATCAGGCATTTAAGTGGCAAATATCCGAGAGCAGTTGCTATGATCAGAGCG
TTGTGAGATTTAGCTTTTAGTAGAAATCATACTTTGATATTGTCATGGCTGTAGTTTCATGATATCTATCCTTATAATCTATACCTTAACTTCACGACCAG
Protein sequenceShow/hide protein sequence
MPAKDNFQGVSNCYVFKSRLQEYAQKVGLPTPVYETIKEGPSHEPTFHSTVIVNDVRYNSLPGFSNRKAAEQSAAEVALMELSKSSDLNPHVSQPVHETGLCKNLLQEYA
QKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVS
RKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAKILCRIPSLERLI