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IVF0016351 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016351
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description30S ribosomal protein S8, chloroplastic
Genome locationchr07:4200267..4200443
RNA-Seq ExpressionIVF0016351
SyntenyIVF0016351
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000630 - Ribosomal protein S8
IPR035987 - Ribosomal protein S8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009236314.1 ribosomal protein S8 [Gynostemma pentaphyllum]5.33e-2891.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
YP_009430662.1 ribosomal protein S8 [Gynostemma cardiospermum]5.33e-2891.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
YP_009431592.1 ribosomal protein S8 [Citrullus amarus]4.35e-2789.66Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH E+NKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
YP_009439926.1 ribosomal protein S8 [Gynostemma caulopterum]5.33e-2891.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
YP_009752025.1 ribosomal protein S8 [Cionosicys macranthus]3.24e-2789.66Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH E+NKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
TrEMBL top hitse value%identityAlignment
A0A109WXX2 30S ribosomal protein S8, chloroplastic4.4e-2091.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
A0A291IAR0 30S ribosomal protein S8, chloroplastic4.4e-2091.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
A0A291IB69 30S ribosomal protein S8, chloroplastic4.4e-2091.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
A0A291IBG4 30S ribosomal protein S8, chloroplastic4.4e-2091.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
A0A2L0WR37 30S ribosomal protein S8, chloroplastic4.4e-2091.38Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
SwissProt top hitse value%identityAlignment
P59033 30S ribosomal protein S8, chloroplastic2.7e-1981.03Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIIT IRNADMN+KGMVQ+P TNITE IVK LLREGF+EN+RKH ENNK F
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Q2PMQ0 30S ribosomal protein S8, chloroplastic6.1e-1981.03Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI +IIT IRNADMN+KGMVQIP TNITENIVK LLREGF+EN+RKH EN+K F
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Q49KW3 30S ribosomal protein S8, chloroplastic6.1e-1981.03Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MG+DTI +IITSIRNADMNRKG +QI STNITENIVK LLREGFI+N+RKH ENNK F
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Q4VZK0 30S ribosomal protein S8, chloroplastic1.3e-2187.93Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI NIITSIRNADMNRKGMV+IP+TNITENIVK LLREGFIEN+RKH E+NKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Q6EW16 30S ribosomal protein S8, chloroplastic2.7e-1981.03Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MG+DTI +IIT IRNADM++KG V+IPSTNITENIVK LLREGFIEN+RKH ENNKDF
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
Arabidopsis top hitse value%identityAlignment
ATCG00770.1 ribosomal protein S82.8e-1981.03Show/hide
Query:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF
        MGKDTI +IITSIRNADMNRKG V+I STNITE+IVK LLREGFIEN+RKH ENN+ F
Subjt:  MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAAGGACACTATTACTAACATAATAACCTCTATTCGTAATGCTGACATGAATAGAAAAGGAATGGTTCAAATACCATCTACTAACATCACCGAAAACATTGTGAA
AAGACTTTTACGAGAAGGTTTTATTGAAAACTTAAGGAAACATTGGGAAAACAACAAGGATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAAGGACACTATTACTAACATAATAACCTCTATTCGTAATGCTGACATGAATAGAAAAGGAATGGTTCAAATACCATCTACTAACATCACCGAAAACATTGTGAA
AAGACTTTTACGAGAAGGTTTTATTGAAAACTTAAGGAAACATTGGGAAAACAACAAGGATTTTTAG
Protein sequenceShow/hide protein sequence
MGKDTITNIITSIRNADMNRKGMVQIPSTNITENIVKRLLREGFIENLRKHWENNKDF