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IVF0016366 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016366
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:16838629..16838841
RNA-Seq ExpressionIVF0016366
SyntenyIVF0016366
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035772.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]8.39e-3298.53Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG
        MTEE+TIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG

KAA0040128.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.58e-3087.14Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTE+ETIVEFNVRVLDI N+SDAL KKMSDSKLV+KVLRSLPS+FNMKVT IEEANDL KMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

KAA0043137.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.63e-3190Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTE+ETI EFNVRVLDIANESDA  +KMSDSKLVRKVLRSLPSKFNMKVT IEEANDLSKMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

KAA0055019.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.99e-3090Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTEEETI EFNVRVLDI NESD LE+KMSDSKLV KVLRSLPSKFNMKVT IEEANDLSKMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

KAA0067422.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.85e-2989.06Show/hide
Query:  IVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        +VEFNVRVLDIAN+SDAL +KMSDSKLVRKVLRSLPSKFNMKVT IE+ANDLSKMKL+ELFGSL
Subjt:  IVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

TrEMBL top hitse value%identityAlignment
A0A5A7SWY8 Flocculation protein FLO11-like6.4e-2698.53Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG
        MTEE+TIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFG

A0A5A7TAY2 Gag-pol polyprotein1.9e-2287.14Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTE+ETIVEFNVRVLDI N+SDAL KKMSDSKLV+KVLRSLPS+FNMKVT IEEANDL KMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

A0A5A7TMW2 Gag-proteinase polyprotein1.8e-2390Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTE+ETI EFNVRVLDIANESDA  +KMSDSKLVRKVLRSLPSKFNMKVT IEEANDLSKMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

A0A5A7UNH8 Gag-pol polyprotein3.0e-2390Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        MTEEETI EFNVRVLDI NESD LE+KMSDSKLV KVLRSLPSKFNMKVT IEEANDLSKMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

A0A5A7V046 Gag-pol polyprotein1.1e-2290Show/hide
Query:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL
        M E ETI EFNVRVLDIANESDAL +KMSDSKLVRKVLRSLPSKFNMKVT IEEANDLSKMKL+ELFGSL
Subjt:  MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGAAGAGACTATTGTTGAGTTCAATGTTCGTGTACTTGATATTGCCAACGAATCAGATGCACTAGAAAAAAAGATGTCTGACTCTAAACTTGTTCGGAAAGT
TCTTAGATCTTTACCATCTAAGTTTAACATGAAAGTCACGGAGATTGAGGAAGCTAATGATCTATCAAAAATGAAGTTGAATGAATTGTTTGGGTCATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGAAGAGACTATTGTTGAGTTCAATGTTCGTGTACTTGATATTGCCAACGAATCAGATGCACTAGAAAAAAAGATGTCTGACTCTAAACTTGTTCGGAAAGT
TCTTAGATCTTTACCATCTAAGTTTAACATGAAAGTCACGGAGATTGAGGAAGCTAATGATCTATCAAAAATGAAGTTGAATGAATTGTTTGGGTCATTATGA
Protein sequenceShow/hide protein sequence
MTEEETIVEFNVRVLDIANESDALEKKMSDSKLVRKVLRSLPSKFNMKVTEIEEANDLSKMKLNELFGSL