CuGenDBv2

Gene ID	IVF0016374
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	BED-type domain-containing protein
Genome location	chr05:11851964..11852452
RNA-Seq Expression	IVF0016374
Synteny	IVF0016374
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0032269.1 uncharacterized protein E6C27_scaffold219G001030 [Cucumis melo var. makuwa]

8.28e-109

100

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
        DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK

KAA0047882.1 hypothetical protein E6C27_scaffold133G001550 [Cucumis melo var. makuwa]

2.67e-99

95.06

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

KAA0053508.1 uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa]

2.67e-101

93.21

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFT NPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+ FAP+IESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

KAA0066645.1 uncharacterized protein E6C27_scaffold979G00720 [Cucumis melo var. makuwa]

3.73e-100

95.06

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNA YK EMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELMRSHKAEW KV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

TYK03327.1 hypothetical protein E5676_scaffold6571G00020 [Cucumis melo var. makuwa]

1.49e-99

95.06

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SSR3 BED-type domain-containing protein

1.3e-85

100

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
        DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAK

A0A5A7TY62 BED-type domain-containing protein

1.1e-81

95.06

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

A0A5A7V8P5 BED-type domain-containing protein

1.1e-81

95.06

Show/hide

Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

A0A5D3BV42 BED-type domain-containing protein

1.1e-81

95.06

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Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

A0A5D3DR78 BED-type domain-containing protein

1.1e-81

95.06

Show/hide

Query:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY
        MSKKKEIKEQRNLIVDIDVQDYG+EDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPE+VVQNRKNDKGKQTSLNA YKKEMRE TIQRIARWFY
Subjt:  MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFY

Query:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV
        DAGVPLNACTY+SFAPMIESIGQFGPGLKPPTYHELRV CLKKELE TNELM SHKAEWAKV
Subjt:  DAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43260.1 hAT transposon superfamily protein

4.6e-11

41.79

Show/hide

Query:  QRIARWFYDAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEW
        Q +ARW Y  G+P NA   +    M+E  GQFGPG+ PP+ ++LR   LK+E+     LM   + EW
Subjt:  QRIARWFYDAGVPLNACTYNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCAAGAAAAAGGAGATCAAAGAACAAAGAAATTTGATTGTGGACATTGATGTACAAGATTATGGTATCGAGGATGAAGATGAAGGGAGTATTAGTGTAAATAACAG
AGCAACATCAAGTGGCTCGAGCTTGAAGAAGCCAAGACAAAAGGGTCCAATGGATGCATTTTTTACTCCCAATCCAGAAACTGTGGTTCAAAATAGAAAGAATGACAAAG
GAAAACAAACTTCGTTGAATGCGACGTACAAGAAGGAAATGAGGGAGCGCACCATCCAAAGAATTGCTCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACA
TATAATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTTGGTCCTGGATTGAAACCACCAACATATCATGAGTTGAGAGTTTCATGTTTGAAGAAAGAATTAGAAAC
AACAAATGAGTTGATGAGGAGCCATAAAGCAGAGTGGGCTAAGGTTTGA

mRNA sequence

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Protein sequence

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MSKKKEIKEQRNLIVDIDVQDYGIEDEDEGSISVNNRATSSGSSLKKPRQKGPMDAFFTPNPETVVQNRKNDKGKQTSLNATYKKEMRERTIQRIARWFYDAGVPLNACT
YNSFAPMIESIGQFGPGLKPPTYHELRVSCLKKELETTNELMRSHKAEWAKV

IVF0016374 (gene) of Melon (IVF77) v1 genome