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IVF0016378 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016378
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationchr01:2751397..2751991
RNA-Seq ExpressionIVF0016378
SyntenyIVF0016378
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]4.77e-64100Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
Subjt:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]4.93e-4586.81Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMT-SIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIR
        MAK CLLFCLIV EI LIQA+T SIATTT+LPLS APE +EKGTREGS+VAEAPEIRRLGKHHGDKS+AGGGVIIGGLVTA+FAAVFCYIR
Subjt:  MAKTCLLFCLIVAEILLIQAMT-SIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]2.19e-4479.41Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAK  LL CLI+A+ILLIQAM S ATTT   +SAAPEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]7.31e-4378.43Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAK  LL  LI+A+ILLIQAM S ATTT   +SAAPEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDS
Subjt:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

XP_023886160.1 uncharacterized protein LOC111998295 [Quercus suber]2.77e-2857.26Show/hide
Query:  LFC--LIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAI
        LFC  +I+AEIL++QAM                         +A   D P+S+  E  E G +E S+VAEAPEIRRLGKHH DKSVAGGGVIIGGLVTAI
Subjt:  LFC--LIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAI

Query:  FAAVFCYIRVTRKRDGV
        FAAVFCYIRVTRKR  V
Subjt:  FAAVFCYIRVTRKRDGV

TrEMBL top hitse value%identityAlignment
A0A067E958 Uncharacterized protein7.2e-1855.65Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDV------------AEAPEIRRLGK---HHGDKSVAGGGVIIGGLVTAIFAAV
        MA+  L+   IVAEIL++QA+   +    +  +  PEPA    +  S V            AEAPEIRRLGK   HH DKSVAGGGVIIGGLVTAIFAAV
Subjt:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDV------------AEAPEIRRLGK---HHGDKSVAGGGVIIGGLVTAIFAAV

Query:  FCYIRVTRKRDGVDS
        FCYIRVTRKR+G D+
Subjt:  FCYIRVTRKRDGVDS

A0A0A0K3N0 Uncharacterized protein8.7e-4088.35Show/hide
Query:  MAKTCLLFCLIVAEILLIQAM-TSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        MAK CLLFCLIV EI LIQA+ TSIATTT+LPLS APE +EKGTREGS+VAEAPEIRRLGKHHGDKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVD
Subjt:  MAKTCLLFCLIVAEILLIQAM-TSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

Query:  SVH
        SVH
Subjt:  SVH

A0A2N9IXN3 Uncharacterized protein1.5e-2056.52Show/hide
Query:  LFCLIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFA
        LFCLI+AEIL++QAM                         +A   D P+S+  E  E  ++E SDVAEAP IRR+GKHH DKS+AGGGVIIGGL TAIFA
Subjt:  LFCLIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFA

Query:  AVFCYIRVTRKRDGV
         VFCYIRVTRKRDGV
Subjt:  AVFCYIRVTRKRDGV

A0A5D3C590 Uncharacterized protein2.1e-46100Show/hide
Query:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
Subjt:  MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

A0A7N2R9A0 Uncharacterized protein1.4e-1856.41Show/hide
Query:  LFC--LIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAI
        LFC  +I+AEIL++QAM                         +A   D P+S+     E G +E S+VAEAPEIRRLGKHH DKSVAGGGVIIGGLVTAI
Subjt:  LFC--LIVAEILLIQAMTS-----------------------IATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAI

Query:  FAAVFCYIRVTRKRDGV
        FAAVFCYIRVTRKR  V
Subjt:  FAAVFCYIRVTRKRDGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein2.1e-0638.04Show/hide
Query:  LLFCLIVAEILLIQAMTSIA-TTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHG--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK
        ++ C ++  +  + A +S A       L     P E+   E  +V+   E  R G HH   ++SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  LLFCLIVAEILLIQAMTSIA-TTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHG--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAACTTGTCTTCTTTTTTGCCTCATTGTGGCCGAGATCTTGCTAATTCAAGCAATGACTTCCATTGCTACAACAACAGATCTCCCTCTGTCGGCGGCGCCGGA
GCCAGCGGAGAAGGGGACCAGAGAAGGATCTGACGTGGCGGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCATCATGGCGATAAGTCGGTGGCCGGTGGGGGAGTCATCA
TCGGTGGCCTTGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTAA
mRNA sequenceShow/hide mRNA sequence
CAAAACCCAAAAAAGCTCCCAAATTCCCCCTCAAATTCAGAAACCCATTTTCATCAAACCTCCTTAAACTAAATAAAAAGCTTCCTCATTTCCAAATCCCATGGCCAAAA
CTTGTCTTCTTTTTTGCCTCATTGTGGCCGAGATCTTGCTAATTCAAGCAATGACTTCCATTGCTACAACAACAGATCTCCCTCTGTCGGCGGCGCCGGAGCCAGCGGAG
AAGGGGACCAGAGAAGGATCTGACGTGGCGGAGGCGCCGGAGATCCGGCGGCTGGGAAAGCATCATGGCGATAAGTCGGTGGCCGGTGGGGGAGTCATCATCGGTGGCCT
TGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTAAGATTGATCCTAATTTCTAGTCTTTTTTCTTT
TTCCTTACACAAACCTTATATATATATATATATATAACATATTCTTTTGATTCTTAAATTGTTTCGCCCTTTTTTGGAGGAAATTTTAGAGATTGTGTGGTTGGGTGATG
ACTGGTGTTTGGTTGTGAATGTAAAAGAGTAATGTTCATAGAGAG
Protein sequenceShow/hide protein sequence
MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH