; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016402 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016402
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:10291684..10292412
RNA-Seq ExpressionIVF0016402
SyntenyIVF0016402
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]2.03e-12676.76Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLPTEV+G KMTNFS EGGSIYFGEYEA ELIHNGARIQWHANL NR+KHE MVDTHDSSFLQ SYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYR G QFGFYQD+PN +GGMPP IT DN+L+HWRICTRR TL ELYL   SLEPCKHVTQRFTDWW  KH  YFEDN HHLVSS I PPSQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRGSNLG KEI LVEAM   LE+E+ EHK ESDS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

KAA0025968.1 hypothetical protein E6C27_scaffold34G002830 [Cucumis melo var. makuwa]6.10e-15390.99Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMR CY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHE YFEDNIHHLVSS IPPPSQPNL
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE
        PKNRGSNLGDKEI LVEAMVATLEDEI EHKG+
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]1.01e-13580.5Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVH WLAHYFGTHYPLPTEV+G KMTNF DEGGSIYFGEYEA ELIHNG RIQWHANLPN+NKHECMVDTHDSSFLQTSYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
              YRFGWQF F+QDIPN +  MPP ITPDNMLHHWRICTR NTL+ELYL A SLEPCKHVTQRFTDWW+M+H  YFEDNIHHLVSSVIPPPSQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRG+NLG KEIRLVEAM ATLE+EINEHK E+DS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.49e-12778.42Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLPTEV+G KMTNFSDEGGSIYFGEYEA ELIHNGARIQWHA+L NR+KHE MVDTHDSSFLQTSYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYRFG QFGFYQD+PN +GGM P IT DN+L+HWRICTRRNTLSELYL A SLEPCKHVTQRFTDWW  KH  YFEDN HHLVSS IPP SQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRGSNLG KEIRLVEAM   LE+E+ E K ESDS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

TYK04206.1 hypothetical protein E5676_scaffold24967G00050 [Cucumis melo var. makuwa]2.45e-14190.41Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFG
        MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYF                 
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFG

Query:  FYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR
           DIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR
Subjt:  FYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR

Query:  LVEAMVATLEDEINEHKGE
        LVEAMVATLEDEINEHKG+
Subjt:  LVEAMVATLEDEINEHKGE

TrEMBL top hitse value%identityAlignment
A0A5A7SIG6 PMD domain-containing protein1.5e-12490.99Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMR CY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHE YFEDNIHHLVSS IPPPSQPNL
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE
        PKNRGSNLGDKEI LVEAMVATLEDEI EHKG+
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGE

A0A5A7TX42 Uncharacterized protein4.9e-10778.42Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLPTEV+G KMTNFSDEGGSIYFGEYEA ELIHNGARIQWHA+L NR+KHE MVDTHDSSFLQTSYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYRFG QFGFYQD+PN +GGM P IT DN+L+HWRICTRRNTLSELYL A SLEPCKHVTQRFTDWW  KH  YFEDN HHLVSS IPP SQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRGSNLG KEIRLVEAM   LE+E+ E K ESDS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

A0A5A7UGW6 PMD domain-containing protein7.0e-10678.42Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVHGWLAHYFGTHYPLP EV+G KMTNFS EGGSIYFGEYEA ELIHNG RIQWHANL NRNKHE MVDTHDSSFLQ SYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
             PYRFG QFGFYQD+PN +GGMPP IT DN+L+HWRIC RRNTLSELYL   SLEPCKHVTQRFTDWW  KH  YFEDN HHLVSS IPPPSQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRGSNLG KEIRLVEAM   LEDE+NEH  ESDS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

A0A5D3C1C3 Uncharacterized protein3.1e-11490.41Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFG
        MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYF                 
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFG

Query:  FYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR
           DIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR
Subjt:  FYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIR

Query:  LVEAMVATLEDEINEHKGE
        LVEAMVATLEDEINEHKG+
Subjt:  LVEAMVATLEDEINEHKGE

A0A5D3D2A0 PMD domain-containing protein5.9e-11380.5Show/hide
Query:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------
        MHYVH WLAHYFGTHYPLPTEV+G KMTNF DEGGSIYFGEYEA ELIHNG RIQWHANLPN+NKHECMVDTHDSSFLQTSYFVSMRSCY          
Subjt:  MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYY---------

Query:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL
              YRFGWQF F+QDIPN +  MPP ITPDNMLHHWRICTR NTL+ELYL A SLEPCKHVTQRFTDWW+M+H  YFEDNIHHLVSSVIPPPSQP L
Subjt:  -----PYRFGWQFGFYQDIPNALGGMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNL

Query:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR
        PKNRG+NLG KEIRLVEAM ATLE+EINEHK E+DS K+DR
Subjt:  PKNRGSNLGDKEIRLVEAMVATLEDEINEHKGESDSIKNDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTACGTCCATGGCTGGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCCACAGAAGTTCAAGGTTCCAAAATGACTAACTTTTCCGACGAAGGCGGATCTAT
TTATTTTGGCGAATATGAGGCGCTAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACGCTAACCTCCCGAACAGGAATAAACACGAATGCATGGTTGATACCCATG
ATTCATCATTTCTGCAGACTTCTTATTTTGTGAGCATGCGTTCCTGCTATTATCCGTATCGATTTGGATGGCAATTTGGCTTTTACCAGGACATCCCTAATGCTTTAGGG
GGCATGCCACCTCTGATCACACCAGATAATATGTTACACCACTGGAGGATATGTACGAGGCGTAATACTTTATCTGAGTTATACTTGTCCGCCCATTCGTTAGAGCCTTG
CAAGCATGTGACACAGCGATTCACAGACTGGTGGGCCATGAAGCACGAGATCTATTTTGAGGATAACATACATCATCTGGTGAGTAGTGTCATTCCTCCCCCTTCACAAC
CTAATCTACCCAAGAACCGAGGAAGCAACCTGGGTGATAAAGAAATTCGCCTGGTTGAGGCGATGGTTGCTACTCTCGAAGATGAGATAAATGAGCATAAAGGTGAGAGC
GATAGCATAAAAAATGATCGTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTACGTCCATGGCTGGTTAGCCCATTATTTTGGCACGCATTATCCACTTCCCACAGAAGTTCAAGGTTCCAAAATGACTAACTTTTCCGACGAAGGCGGATCTAT
TTATTTTGGCGAATATGAGGCGCTAGAACTGATCCATAATGGTGCAAGAATTCAGTGGCACGCTAACCTCCCGAACAGGAATAAACACGAATGCATGGTTGATACCCATG
ATTCATCATTTCTGCAGACTTCTTATTTTGTGAGCATGCGTTCCTGCTATTATCCGTATCGATTTGGATGGCAATTTGGCTTTTACCAGGACATCCCTAATGCTTTAGGG
GGCATGCCACCTCTGATCACACCAGATAATATGTTACACCACTGGAGGATATGTACGAGGCGTAATACTTTATCTGAGTTATACTTGTCCGCCCATTCGTTAGAGCCTTG
CAAGCATGTGACACAGCGATTCACAGACTGGTGGGCCATGAAGCACGAGATCTATTTTGAGGATAACATACATCATCTGGTGAGTAGTGTCATTCCTCCCCCTTCACAAC
CTAATCTACCCAAGAACCGAGGAAGCAACCTGGGTGATAAAGAAATTCGCCTGGTTGAGGCGATGGTTGCTACTCTCGAAGATGAGATAAATGAGCATAAAGGTGAGAGC
GATAGCATAAAAAATGATCGTCGTTAA
Protein sequenceShow/hide protein sequence
MHYVHGWLAHYFGTHYPLPTEVQGSKMTNFSDEGGSIYFGEYEALELIHNGARIQWHANLPNRNKHECMVDTHDSSFLQTSYFVSMRSCYYPYRFGWQFGFYQDIPNALG
GMPPLITPDNMLHHWRICTRRNTLSELYLSAHSLEPCKHVTQRFTDWWAMKHEIYFEDNIHHLVSSVIPPPSQPNLPKNRGSNLGDKEIRLVEAMVATLEDEINEHKGES
DSIKNDRR