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IVF0016418 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016418
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA polymerase, beta-like region
Genome locationchr08:29213269..29214339
RNA-Seq ExpressionIVF0016418
SyntenyIVF0016418
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KXM9 DNA polymerase, beta-like region1.3e-5285.11Show/hide
Query:  MVIRISQISRTSAVSKVTTTITIRLMSRGPRRRLPIRYPTGSRRRTVRPENASGMNIDSTNVAAINPERRTIRFANGASARGELAEGEFMAAVDEMAELL
        M+IRIS I  TSAV K+TTTIT+R+ SRGP RRL IRYPTGSRRRTVR ENA GMNIDSTNVAAINPERRTI FAN ASARGELAEGEFMAAVDE+AELL
Subjt:  MVIRISQISRTSAVSKVTTTITIRLMSRGPRRRLPIRYPTGSRRRTVRPENASGMNIDSTNVAAINPERRTIRFANGASARGELAEGEFMAAVDEMAELL

Query:  RELGAKWVDIEVAVVAAVEHAVDGFTADIALAMVHRGDQSK
        RELGAKW+DIEVAV+AAVEHAVDGFTADIA AMVH  DQSK
Subjt:  RELGAKWVDIEVAVVAAVEHAVDGFTADIALAMVHRGDQSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATTCGGATATCCCAAATTAGCCGGACCTCCGCCGTAAGCAAAGTAACCACCACCATAACCATTCGGTTGATGAGCCGTGGTCCACGGCGGCGCTTGCCAATAAG
ATATCCCACGGGTTCCCGTCGACGAACCGTACGGCCTGAGAATGCATCTGGGATGAATATTGACTCGACAAACGTCGCAGCCATAAACCCAGAAAGAAGAACAATCCGTT
TCGCAAACGGAGCATCGGCCAGAGGAGAGCTTGCGGAGGGTGAGTTTATGGCGGCCGTCGATGAGATGGCGGAGCTGCTCAGGGAATTGGGTGCAAAGTGGGTGGACATC
GAAGTCGCAGTGGTTGCAGCGGTAGAACATGCCGTTGATGGATTCACGGCAGATATCGCATTGGCGATGGTTCATAGGGGGGATCAGAGCAAGGGGTGGGAGTGGAGAAA
GGAGGATAATTCCTCGGGGGAATTGGAGCAGAACTTGTGGATGTCGACATGGCAAGGTTGGCATCGGAATCGGAGGCCGGAGTCGACGGTGTTGCAGATGTGGCAAGTGT
ATTTTTGGTCGTCGGAATAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTTCCGTACAATTATGGCAGATTCATTTCTTGGAAGAAAAAAAATCGTCTAGTCGGAGGGAGAGAGAAAGCATATAAAATGCAAATATTGCTTCTTTTATATTCTT
TTAACTTAAGAAGAAGATGAACAATAAAAAGCCATTGGATGAAGAATTACTATTAGGCACCAAAAGAACCGAAAATAAACTCAATAATAGCACCTGCCGTTAAATTTTGA
ACAAGACCAAACATTCCAGCCCCCAACATTGGTACCCAATTCGGCCGCGACGGTGGTTGTCCACCATAGTTACCTCCATAAGAATAACCAACATGGTTATTCGGATATCC
CAAATTAGCCGGACCTCCGCCGTAAGCAAAGTAACCACCACCATAACCATTCGGTTGATGAGCCGTGGTCCACGGCGGCGCTTGCCAATAAGATATCCCACGGGTTCCCG
TCGACGAACCGTACGGCCTGAGAATGCATCTGGGATGAATATTGACTCGACAAACGTCGCAGCCATAAACCCAGAAAGAAGAACAATCCGTTTCGCAAACGGAGCATCGG
CCAGAGGAGAGCTTGCGGAGGGTGAGTTTATGGCGGCCGTCGATGAGATGGCGGAGCTGCTCAGGGAATTGGGTGCAAAGTGGGTGGACATCGAAGTCGCAGTGGTTGCA
GCGGTAGAACATGCCGTTGATGGATTCACGGCAGATATCGCATTGGCGATGGTTCATAGGGGGGATCAGAGCAAGGGGTGGGAGTGGAGAAAGGAGGATAATTCCTCGGG
GGAATTGGAGCAGAACTTGTGGATGTCGACATGGCAAGGTTGGCATCGGAATCGGAGGCCGGAGTCGACGGTGTTGCAGATGTGGCAAGTGTATTTTTGGTCGTCGGAAT
AATGGGTTAGAGGGTGGTTTGGATGGAAATGGGAGAAATGGTATGTGGGTGCATTCATCGCCATGATTAATCTCAGCAGTGAAGGTTTGTCCTTTTAACTGTGGGAGTTT
ATTTAAAGCGTGTGGAGCTGTAGACTTGGACTTGGCGAAGAGGAAACTGTTTTGGTCTTCGTCTTTGTCATTTTGTAGTGG
Protein sequenceShow/hide protein sequence
MVIRISQISRTSAVSKVTTTITIRLMSRGPRRRLPIRYPTGSRRRTVRPENASGMNIDSTNVAAINPERRTIRFANGASARGELAEGEFMAAVDEMAELLRELGAKWVDI
EVAVVAAVEHAVDGFTADIALAMVHRGDQSKGWEWRKEDNSSGELEQNLWMSTWQGWHRNRRPESTVLQMWQVYFWSSE