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IVF0016427 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016427
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:11838509..11838784
RNA-Seq ExpressionIVF0016427
SyntenyIVF0016427
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.60e-2365.38Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDG-VPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD  YVFGKD+ATRA  ETF DV  NVPN F+G VPL DSHD  I M+Y Q V M PDEM G R G++SE K C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDG-VPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

KAA0042340.1 retrotransposon protein [Cucumis melo var. makuwa]1.02e-2364.1Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD SYVFGKDQAT A  ETF DV  N+PN F DGVPLGDSH   I  +Y Q V M  DEM GTR G++SE + C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

KAA0056515.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.23e-2161.54Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD SYVFGKD+AT+   ETF  V  NVPN F DGVPLGDSH+  I M+Y Q V M  DEM G R G++SE + C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

KAA0067395.1 retrotransposon protein [Cucumis melo var. makuwa]4.28e-44100Show/hide
Query:  MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV
        MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV
Subjt:  MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV

KGN66659.1 hypothetical protein Csa_007642 [Cucumis sativus]3.40e-2167.19Show/hide
Query:  KDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGK
        KDQAT   LE FVD++ NVPN F DGVP GDSHDP ILM+Y Q +DM  DEMLGT VG++SEG+
Subjt:  KDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGK

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI15.8e-1965.38Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDG-VPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD  YVFGKD+ATRA  ETF DV  NVPN F+G VPL DSHD  I M+Y Q V M PDEM G R G++SE K C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDG-VPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

A0A5A7U0H7 Retrotransposon protein2.1e-1660.26Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD SYVFGKD+AT A  ETF +V  NV N F D +PLGDSHD  I  +Y Q V M PDEM G R G++SE + C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

A0A5A7USN6 Putative nuclease HARBI15.4e-1761.54Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD SYVFGKD+AT+   ETF  V  NVPN F DGVPLGDSH+  I M+Y Q V M  DEM G R G++SE + C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

A0A5D3CVB7 Retrotransposon protein3.8e-1864.1Show/hide
Query:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC
        FPYYDD SYVFGKDQAT A  ETF DV  N+PN F DGVPLGDSH   I  +Y Q V M  DEM GTR G++SE + C
Subjt:  FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKC

A0A5D3DS65 Retrotransposon protein5.4e-33100Show/hide
Query:  MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV
        MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV
Subjt:  MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGA
TGGTGTTCCCCTTGGTGATTCACACGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTG
AAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGA
TGGTGTTCCCCTTGGTGATTCACACGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTG
AAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA
Protein sequenceShow/hide protein sequence
MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKCFKWKQEEMRWPIV