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IVF0016513 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016513
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNon-LTR retroelement reverse transcriptase-like protein
Genome locationchr11:18828141..18828416
RNA-Seq ExpressionIVF0016513
SyntenyIVF0016513
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.82e-2673.33Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYL
        M +ASNE RTLV CQKPL+MHLQ+RKRAELEDF    QEN SEN L+ VFSSWGKK SP+GFFPL RIG+ SF L
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYL

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]7.07e-2662.75Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQ---------------ENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNP
        + NAS E RTLV CQKPL MHLQQRK AELEDF  S Q               ENASEN LDSVFSS G+K+  D FFPLLRIG+ SF L GSYS DFNP
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQ---------------ENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNP

Query:  PS
         S
Subjt:  PS

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]4.88e-3170Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHA
        MANASNE +TLV CQKPL+M+LQ+RK+ EL+DF  S QENAS+N  DS FSSWGKKRSP GFF LLRIG+ SF L GSY  DFN  SWH+
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHA

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.39e-2371.43Show/hide
Query:  LQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHAP
        +++R RA+L+DF+ S QENASEN  DSVFSSW KK +PDGFFPLLRIG+ SF L GSYS DFNP SWHAP
Subjt:  LQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHAP

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]2.22e-2879.17Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTS
        MANASNE R LV CQKPL+MHLQ+RKR ELEDF+ S QEN SEN  DS FSSWGKKRSPDGFFPLLRIG+ S
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTS

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein6.4e-2670Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHA
        MANASNE +TLV CQKPL+M+LQ+RK+ EL+DF  S QENAS+N  DS FSSWGKKRSP GFF LLRIG+ SF L GSY  DFN  SWH+
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHA

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein1.5e-1971.43Show/hide
Query:  LQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHAP
        +++R RA+L+DF+ S QENASEN  DSVFSSW KK +PDGFFPLLRIG+ SF L GSYS DFNP SWHAP
Subjt:  LQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHAP

A0A5D3CGX3 Uncharacterized protein6.2e-2162.75Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQ---------------ENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNP
        + NAS E RTLV CQKPL MHLQQRK AELEDF  S Q               ENASEN LDSVFSS G+K+  D FFPLLRIG+ SF L GSYS DFNP
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQ---------------ENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNP

Query:  PS
         S
Subjt:  PS

A0A5D3DFP2 Uncharacterized protein2.3e-2379.17Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTS
        MANASNE R LV CQKPL+MHLQ+RKR ELEDF+ S QEN SEN  DS FSSWGKKRSPDGFFPLLRIG+ S
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTS

A0A5D3E5W4 NBS-LRR type resistance protein3.6e-2173.33Show/hide
Query:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYL
        M +ASNE RTLV CQKPL+MHLQ+RKRAELEDF    QEN SEN L+ VFSSWGKK SP+GFFPL RIG+ SF L
Subjt:  MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAACGAGTCGCGAACGCTCGTCTGGTGTCAGAAACCACTTGACATGCATTTGCAGCAAAGGAAACGGGCTGAGCTCGAGGACTTCAAGATTTCTTG
CCAAGAAAATGCGAGCGAGAATGTCCTGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGATGGTTTCTTCCCTTTGCTTCGTATTGGTTATACGTCTTTCT
ATCTTTGGGGCTCGTACTCCATGGACTTCAACCCACCTTCCTGGCATGCTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAACGAGTCGCGAACGCTCGTCTGGTGTCAGAAACCACTTGACATGCATTTGCAGCAAAGGAAACGGGCTGAGCTCGAGGACTTCAAGATTTCTTG
CCAAGAAAATGCGAGCGAGAATGTCCTGGACTCAGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGATGGTTTCTTCCCTTTGCTTCGTATTGGTTATACGTCTTTCT
ATCTTTGGGGCTCGTACTCCATGGACTTCAACCCACCTTCCTGGCATGCTCCCTGA
Protein sequenceShow/hide protein sequence
MANASNESRTLVWCQKPLDMHLQQRKRAELEDFKISCQENASENVLDSVFSSWGKKRSPDGFFPLLRIGYTSFYLWGSYSMDFNPPSWHAP