CuGenDBv2

Gene ID	IVF0016524
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTEF1
Genome location	tig00000060:427164..428513
RNA-Seq Expression	IVF0016524
Synteny	IVF0016524
Gene Ontology terms	GO:0006353 - DNA-templated transcription, termination (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0049466.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

2.19e-188

77.87

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS LFR ILLL+SPS VFS GFS SPLKSLRFLSTSSEIVSS +SA LASNA QL+N RKAVI LLA++G S+SQIS + +R PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FF+SKGLSSPEIAK+V +FPYVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVPDSNI KYLQY+PRVF+ + I
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHKE QIPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

KAA0049469.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa]

7.95e-205

83.88

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RKAVI LLA+HGFS+SQIS + +R PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEIAKLVC+FP VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVPDSNILKY QYQPRVF  +SI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSE RFI+KFINPHKE+ IPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

XP_008439382.1 PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]

1.12e-241

96.17

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

XP_016899003.1 PREDICTED: uncharacterized protein LOC103483819 isoform X3 [Cucumis melo]

2.67e-196

79.51

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRKA      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FF+SKGLSSPEIAK+V +FPYVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVPDSNI KYLQY+PRVF+ + I
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHKE QIPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

XP_016899006.1 PREDICTED: uncharacterized protein LOC107990398 [Cucumis melo]

2.12e-188

79.89

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS LFRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+ NRKAVI  LA++GFS+SQIS   +R PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEI KLVC+ P+ L  SLNKRII  FDYIQAVLGSE K LA IK FA IL RDL ISVGPNIEILKQIGVPDSNILKYLQYQPRVF+I+SI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKEIVERVTEMGFNPQ+LQF+VAVFALRAMTKSTWDKKVEVYRKWGLSEEEI L FKRHPWCM+VSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMD
        KKRLNPRGYVYQVLL KGLIKK  N+  F    EKRFIEK INPHKE QIP LLELY++KLMD
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AYM0 uncharacterized protein LOC103484197

2.7e-189

96.17

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

A0A1S4DSR4 uncharacterized protein LOC103483819 isoform X3

7.4e-155

79.51

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS LFRRILLLRSPSSVFSHGFSE PLKSLRFLSTSSEIVSSPKSASLASN VQ++NNRKA      NHGFS+SQISDI ++ PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FF+SKGLSSPEIAK+V +FPYVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVPDSNI KYLQY+PRVF+ + I
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHK EQIPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

A0A5A7U124 Transcription termination factor MTEF1

2.7e-189

96.17

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

A0A5A7U5J6 Transcription termination factor MTEF1

8.0e-149

77.87

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS LFR ILLL+SPS VFS GFS SPLKSLRFLSTSSEIVSS +SA LASNA QL+N RKAVI LLA++G S+SQIS + +R PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FF+SKGLSSPEIAK+V +FPYVL+GSLN RII  FDYIQAVLGSEEKTL  IK FAGIL +DL+ISVGPNIEILKQIGVPDSNI KYLQY+PRVF+ + I
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE V+RVTEMGFNPQ+LQF+VAVF LR++TKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKING MDF              RP LISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKR+ PRGYVYQVLL KGLIKK A+I +FV  SEK FIEK I+PHK EQIPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

A0A5A7U7J7 Transcription termination factor MTEF1

2.4e-161

83.88

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL
        MS +FRRILLLRSPS VF  GFS+SPLKSLR+LSTSSEIVSSP+SA LASNAVQL+N RKAVI LLA+HGFS+SQIS + +R PQIL+ANPEKILLPKLL
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLL

Query:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI
        FFQSKGLSSPEIAKLVC+FP VL GSL+ RII  FDYIQAVLGSEEKTLA IK F  IL  DL+ISVGPNIEILKQIGVPDSNILKY QYQPRVF  +SI
Subjt:  FFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSI

Query:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
        RFKE VERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDF              RPALISLSL
Subjt:  RFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR
        KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSE RFI+KFINPHK E+IPGLLE Y+QKLMDSRR
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQKLMDSRR

SwissProt top hits

e value

%identity

Alignment

F4JVI3 Transcription termination factor MTERF5, chloroplastic

1.0e-07

20.44

Show/hide

Query:  LENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQ
        L+   K V+E L + G  +S I  I  +RPQI   +    L P + F ++ G+   + AK++  FP +LT S  +++    +++     +EE+    + +
Subjt:  LENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQ

Query:  FAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIIS-SIRFKEIVERVTEMGFNPQRLQFLVA------VFALRAMTKSTWDKKVEVYRKWG
           I++  ++  + P +E  + + V   ++   L   P+ F +S     K + E   E GF    +  +++       F+L+      WD     ++   
Subjt:  FAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIIS-SIRFKEIVERVTEMGFNPQRLQFLVA------VFALRAMTKSTWDKKVEVYRKWG

Query:  LSEEEICLAFKRHPWCMMVS-EDKINGAMDFLRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSS
          + E+     + P     S +++I    + ++ + + L L + L+  G  ++ +++K ++K  +N  +   SS
Subjt:  LSEEEICLAFKRHPWCMMVS-EDKINGAMDFLRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSS

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

9.0e-44

31.22

Show/hide

Query:  MSYLFRRILLLRSPSSVFSHGFSESP--LKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILL
        + +L  RI  L S S V S    +    L+S            S +SA   S  V+L +++K  +V+ L  +HGF+  QI+ + +  P++L+ +PE ++ 
Subjt:  MSYLFRRILLLRSPSSVFSHGFSESP--LKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILL

Query:  PKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQIS--VGPNIEILKQIGVPDSNILKYLQYQPRV
        PKL+FF S G S+ + AK++ + P +L+ SL+KR+I  +D ++++L  EE  +  +K+  GI    L+I+  V   + I +++GVPD +I   +Q  P  
Subjt:  PKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQIS--VGPNIEILKQIGVPDSNILKYLQYQPRV

Query:  FIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPA
        F     RF E++ RV   GF+P++  F+ A+ A    ++S  ++K ++++ +G S+E+   A  R P C+ VS++KI   +++L             RP 
Subjt:  FIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPA

Query:  LISLSLKKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQIPGLLE
        ++SLS++KR+ PR  V  +LL KGL+KK+  N    +      F++KF+  +++E +P L++
Subjt:  LISLSLKKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQIPGLLE

AT1G61970.1 Mitochondrial transcription termination factor family protein

1.5e-30

28.61

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Query:  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAV
        K A   S  V  E  NN  +V+ LL +HGF+ SQIS I R  PQ+L A+ EK L PKL F QS+G SS EI ++V + P +L    +K I   +D+I+  
Subjt:  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAV

Query:  L----GSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKST
        L       EK   ++ Q  G L   ++     N+ +L+++G+P   +   L    QP   +    +F+E +++V EMGF+P   +F+ A+  +  M + T
Subjt:  L----GSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKST

Query:  WDKKVEVY--------------RKW---------------------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
         ++KV +Y              +KW                     G S +E     K  P C+ +S + +    +FL              PA+   SL
Subjt:  WDKKVEVY--------------RKW---------------------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK
        +KR+ PRG V + L+ KGL++ +  +I   +  +++ F+ +++  H ++Q +  L+ +Y+
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK

AT1G61970.2 Mitochondrial transcription termination factor family protein

1.5e-30

28.61

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Query:  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAV
        K A   S  V  E  NN  +V+ LL +HGF+ SQIS I R  PQ+L A+ EK L PKL F QS+G SS EI ++V + P +L    +K I   +D+I+  
Subjt:  KSASLASNAVQLE--NNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAV

Query:  L----GSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKST
        L       EK   ++ Q  G L   ++     N+ +L+++G+P   +   L    QP   +    +F+E +++V EMGF+P   +F+ A+  +  M + T
Subjt:  L----GSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYL--QYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKST

Query:  WDKKVEVY--------------RKW---------------------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL
         ++KV +Y              +KW                     G S +E     K  P C+ +S + +    +FL              PA+   SL
Subjt:  WDKKVEVY--------------RKW---------------------GLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSL

Query:  KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK
        +KR+ PRG V + L+ KGL++ +  +I   +  +++ F+ +++  H ++Q +  L+ +Y+
Subjt:  KKRLNPRGYVYQVLLEKGLIKKQ-ANIPLFVSSSEKRFIEKFINPHKEEQ-IPGLLELYK

AT5G07900.1 Mitochondrial transcription termination factor family protein

7.8e-56

37.62

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Query:  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQ
        SP SA++AS  + L++  +   V+ LL +HGF+ +QIS + ++RP +L AN E +LLPKL FF S G+S   +A+ + + P +LT SL  ++I ++++++
Subjt:  SPKSASLASNAVQLENNRK--AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQ

Query:  AVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAM-TKSTWDK
        +VL S+EK +AA+++   +   D   ++ PNI  + + GVP+  I   L + P   +  +  F+ I ++  EMGFNPQ+  F++A+ AL     KS WDK
Subjt:  AVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAM-TKSTWDK

Query:  KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFI
          EVY++WG SE++I  AFK+HP CMM+SE KIN  M++               P ++  SL+KR+ PR  V +VL+  GL+K+  ++   +   EK F+
Subjt:  KVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFI

Query:  EKFINPHKEEQIPGLLELY
        EK +  + EE++P L+ LY
Subjt:  EKFINPHKEEQIPGLLELY

AT5G64950.1 Mitochondrial transcription termination factor family protein

1.1e-36

31.85

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Query:  NAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLA
        N   LE  R +VI++L ++ FS +QI    R  P+++  N EKIL PKL FF+  G +   + K V     V+  SL K++I   + +++++  + + L 
Subjt:  NAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLA

Query:  AIKQFAG--ILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGL
         I    G  +L+RD  + + PNI  L+  G+  S +   L+ QPR+F +S  + +  V R  ++GF       + AV +L ++++ T+D+KV+++   G 
Subjt:  AIKQFAG--ILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKVEVYRKWGL

Query:  SEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSLKKRLNPRGYVYQVLLEKGLI----KKQANIPLFVSSSEKRFIEKFINP
        SE+EI    +R P  +  SEDK+    +F              RP ++S +L+KR+ PR  V Q+L EKGL+    KK+ N+   V  +E+ F+EK++  
Subjt:  SEEEICLAFKRHPWCMMVSEDKINGAMDFL-------------RPALISLSLKKRLNPRGYVYQVLLEKGLI----KKQANIPLFVSSSEKRFIEKFINP

Query:  HKEEQIPGLLELYK
          +E    LL  YK
Subjt:  HKEEQIPGLLELYK

Sequences

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CDS sequence

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ATGTCTTACTTGTTTCGCAGAATCCTTCTTCTTAGATCTCCATCCTCTGTCTTTTCTCACGGATTTTCCGAAAGCCCCTTGAAATCTCTCAGATTCTTATCTACCTCTTC
TGAGATTGTATCATCTCCGAAATCTGCTTCGTTGGCCTCTAATGCTGTTCAGCTCGAGAATAATCGGAAGGCTGTAATTGAGTTACTTGCGAACCATGGATTCTCTCAAT
CACAAATCTCTGACATTGGCAGGAGGCGGCCTCAAATTCTTGCTGCGAACCCCGAGAAAATTCTATTGCCAAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCA
GAGATTGCCAAATTAGTATGTACATTTCCTTATGTCTTAACAGGAAGTTTAAACAAACGAATTATTTATAATTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAA
GACTCTCGCTGCCATAAAACAGTTTGCGGGTATTCTCGCTCGGGATCTTCAAATTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATA
TTTTAAAATATCTTCAGTACCAGCCTAGAGTGTTCATAATAAGTTCCATCCGATTCAAGGAGATTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAG
TTTCTTGTTGCTGTTTTTGCTCTGCGAGCAATGACCAAATCTACATGGGATAAGAAGGTTGAAGTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCTGTTTGGCTTT
TAAAAGGCATCCATGGTGTATGATGGTTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTAAGACCAGCTTTAATTTCACTTAGTTTGAAGAAGAGGCTTAATCCTA
GAGGCTACGTTTATCAAGTTTTGCTGGAAAAGGGTTTGATTAAGAAGCAAGCGAACATTCCTTTGTTCGTAAGTTCTTCTGAAAAGCGTTTCATAGAAAAATTCATCAAC
CCTCATAAGGAGGAGCAGATTCCTGGATTGTTGGAGTTGTACAAACAGAAATTAATGGATTCTAGAAGATGA

mRNA sequence

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Protein sequence

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MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRKAVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSP
EIAKLVCTFPYVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVPDSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQ
FLVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFLRPALISLSLKKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFIN
PHKEEQIPGLLELYKQKLMDSRR

IVF0016524 (gene) of Melon (IVF77) v1 genome