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IVF0016572 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016572
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:19645042..19645227
RNA-Seq ExpressionIVF0016572
SyntenyIVF0016572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031723.1 retrotransposon protein [Cucumis melo var. makuwa]5.37e-2066.2Show/hide
Query:  MSASGWIVRVIRRREIKCERWMAEGENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDD
        MSASGWIVRVIRRREIKCERWMAEGENDDDL           R RLRS           E WEWWMAEGDD
Subjt:  MSASGWIVRVIRRREIKCERWMAEGENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDD
TrEMBL top hitse value%identityAlignment
A0A5A7SNB3 Retrotransposon protein1.7e-1466.2Show/hide
Query:  MSASGWIVRVIRRREIKCERWMAEGENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDD
        MSASGWIVRVIRRREIKCERWMAEGENDDDL           R RLRS           E WEWWMAEGDD
Subjt:  MSASGWIVRVIRRREIKCERWMAEGENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCGAGCGGTTGGATTGTTCGAGTGATTCGACGGCGGGAAATCAAATGCGAGCGATGGATGGCGGAGGGAGAAAACGACGATGATCTGTTGGATTGTTCGAGTGA
TTCGGCGGCCGAAAATCGTATACGACTGAGGTCTGAGGGCTGGGAGTGGTGGATGGCAGAGGGAGACGACGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCGAGCGGTTGGATTGTTCGAGTGATTCGACGGCGGGAAATCAAATGCGAGCGATGGATGGCGGAGGGAGAAAACGACGATGATCTGTTGGATTGTTCGAGTGA
TTCGGCGGCCGAAAATCGTATACGACTGAGGTCTGAGGGCTGGGAGTGGTGGATGGCAGAGGGAGACGACGGCTGA
Protein sequenceShow/hide protein sequence
MSASGWIVRVIRRREIKCERWMAEGENDDDLLDCSSDSAAENRIRLRSEGWEWWMAEGDDG