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IVF0016580 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016580
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBeta-galactosidase
Genome locationtig00195367:749794..750223
RNA-Seq ExpressionIVF0016580
SyntenyIVF0016580
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025942.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]3.67e-4867.97Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARN-----------Q
        MDLC+ETVW T NDG  YAKLEEAD  YDFL GLNPKFD VCG ILGQRPLPSLMEVC++VRLEEDR NAM +LTTP IDS  F+AR+           Q
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARN-----------Q

Query:  SLYVSTAKNSGTPRINVGNSTIIPQEVR
         L VSTA N+GT RI+VGNST++PQE +
Subjt:  SLYVSTAKNSGTPRINVGNSTIIPQEVR

KAA0041425.1 Beta-galactosidase [Cucumis melo var. makuwa]4.42e-5165Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ
        MDLCRE+VW T ND   YAKLEE DR YDFL  LNPKFD VCG ILGQRPLPSLMEVC+EVRLEEDRTNAM +L             P I +      +Q
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ

Query:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGV
         L VSTA+N+GTPRI+VGNST++PQEV N  PTRNRTQ V
Subjt:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGV

KAA0048797.1 reverse transcriptase [Cucumis melo var. makuwa]3.72e-5398.85Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNAR
        MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN R
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNAR

KAA0058176.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.00e-5070Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQSLYVSTAKNSG
        MDLCRETVW T NDG  YAKLEEAD  YDFL GLNPKFD VCG+ILGQRPLPSLMEVC+EVRLEEDRTNAM +LT P IDS AF+A              
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQSLYVSTAKNSG

Query:  TPRINVGNSTIIPQEVRNILPTRNRTQGVP
        TPRI+VG+ST++PQEVRN   TRN+TQ VP
Subjt:  TPRINVGNSTIIPQEVRNILPTRNRTQGVP

KAA0065739.1 Beta-galactosidase [Cucumis melo var. makuwa]1.27e-4967.38Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ
        MDLCRETVW T ND   YAKLEEADR YDFL GLNPKFD VCG ILGQR LPSLMEVC+EVRLEEDRTNAM +LTT           P I        +Q
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ

Query:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGVP
         L VSTA+N+GTPRI+VGNST++PQEVRN  P RNRTQ +P
Subjt:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGVP

TrEMBL top hitse value%identityAlignment
A0A5A7T6N2 Beta-galactosidase3.5e-4169.29Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN----------ARNQS
        MDLCRETVW TSND   YAKLEE DR YDFL GLN KFD VCG ILGQRPLPSLMEVC+EVRLEEDRTNAM +LTTP IDS AF+            +Q 
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN----------ARNQS

Query:  LYVSTAKNSGTPRINVGNSTIIPQEVR
        L VSTA+N+GTPRI+VGN T++PQE++
Subjt:  LYVSTAKNSGTPRINVGNSTIIPQEVR

A0A5A7UVH3 Retrovirus-related Pol polyprotein from transposon TNT 1-948.3e-4370Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQSLYVSTAKNSG
        MDLCRETVW T NDG  YAKLEEAD  YDFL GLNPKFD VCG+ILGQRPLPSLMEVC+EVRLEEDRTNAM +LT P IDS AF+A              
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQSLYVSTAKNSG

Query:  TPRINVGNSTIIPQEVRNILPTRNRTQGVP
        TPRI+VG+ST++PQEVRN   TRN+TQ VP
Subjt:  TPRINVGNSTIIPQEVRNILPTRNRTQGVP

A0A5A7VJZ8 Beta-galactosidase1.1e-4267.38Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ
        MDLCRETVW T ND   YAKLEEADR YDFL GLNPKFD VCG ILGQR LPSLMEVC+EVRLEEDRTNAM +LTT           P I        +Q
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTT-----------PAIDSTAFNARNQ

Query:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGVP
         L VSTA+N+GTPRI+VGNST++PQEVRN  P RNRTQ +P
Subjt:  SLYVSTAKNSGTPRINVGNSTIIPQEVRNILPTRNRTQGVP

A0A5D3DBU1 Reverse transcriptase8.3e-4395.56Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQS
        MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN R+ +
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQS

A0A5D3DU34 Beta-galactosidase3.5e-4169.29Show/hide
Query:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN----------ARNQS
        MDLCRETVW TSND   YAKLEE DR YDFL GLN KFD VCG ILGQRPLPSLMEVC+EVRLEEDRTNAM +LTTP IDS AF+            +Q 
Subjt:  MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFN----------ARNQS

Query:  LYVSTAKNSGTPRINVGNSTIIPQEVR
        L VSTA+N+GTPRI+VGN T++PQE++
Subjt:  LYVSTAKNSGTPRINVGNSTIIPQEVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTGCAGGGAGACAGTTTGGGTCACGTCGAATGACGGTATACTATATGCTAAGCTTGAGGAAGCTGACCGTACTTATGATTTCCTTGGAGGACTTAATCCCAA
ATTTGATATTGTATGTGGTCATATACTTGGACAGAGACCACTTCCATCCTTAATGGAAGTGTGTTATGAAGTCCGTCTTGAAGAAGACCGTACGAATGCCATGAGTATAC
TAACTACCCCTGCCATTGACTCCACTGCCTTCAATGCTAGAAACCAATCCTTGTATGTGAGCACTGCAAAAAACAGTGGCACACCAAGGATCAATGTTGGAAACTCCACG
ATCATCCCCCAGGAGGTAAGAAACATTCTTCCAACAAGAAACAGAACTCAAGGTGTGCCTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTGCAGGGAGACAGTTTGGGTCACGTCGAATGACGGTATACTATATGCTAAGCTTGAGGAAGCTGACCGTACTTATGATTTCCTTGGAGGACTTAATCCCAA
ATTTGATATTGTATGTGGTCATATACTTGGACAGAGACCACTTCCATCCTTAATGGAAGTGTGTTATGAAGTCCGTCTTGAAGAAGACCGTACGAATGCCATGAGTATAC
TAACTACCCCTGCCATTGACTCCACTGCCTTCAATGCTAGAAACCAATCCTTGTATGTGAGCACTGCAAAAAACAGTGGCACACCAAGGATCAATGTTGGAAACTCCACG
ATCATCCCCCAGGAGGTAAGAAACATTCTTCCAACAAGAAACAGAACTCAAGGTGTGCCTATGTAA
Protein sequenceShow/hide protein sequence
MDLCRETVWVTSNDGILYAKLEEADRTYDFLGGLNPKFDIVCGHILGQRPLPSLMEVCYEVRLEEDRTNAMSILTTPAIDSTAFNARNQSLYVSTAKNSGTPRINVGNST
IIPQEVRNILPTRNRTQGVPM