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IVF0016588 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016588
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationtig00000084_ERROPOS800000:621221..621475
RNA-Seq ExpressionIVF0016588
SyntenyIVF0016588
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038279.1 hypothetical protein E6C27_scaffold270G001370 [Cucumis melo var. makuwa]3.03e-4293.9Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRS
        MSA+NYAMDIQF+QVSR RQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPI RN SSFSQVVRS
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRS

KAA0047750.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]6.95e-3076.54Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR
        MSA+NY MD+QF+QVSR RQGSSP+ LSIQ+GPSSLPP+PSTTLL PS V+ P+K AASPAAS SKSPI RN SSFS+VVR
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR

TYJ98086.1 hypothetical protein E5676_scaffold565G00190 [Cucumis melo var. makuwa]2.80e-2772.84Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR
        MSAENYAMD+QFEQVSR RQGS+ R L+IQ+  SSLPP PST LLRPSG ++PNK AASPAAS S+S I RN SS+SQ+VR
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR

TYK19576.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.65e-2771.43Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL
        MSAENYAMD+QFEQVSR RQGS+ R L+IQ+  SSLPP PST LLRPSG ++PNK AASPAAS S+  ISRN SS+SQ+VR  L
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL

TYK19825.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]6.60e-4398.73Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQV
        MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQ+
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQV

TrEMBL top hitse value%identityAlignment
A0A5A7TA98 Uncharacterized protein1.4e-3091.67Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL
        MSA+NYAMDIQF+QVSR RQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPI RN SSFSQVVRS +
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL

A0A5A7TD15 Polyprotein4.8e-2070.24Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL
        MSAENYAMD+QFEQVSR RQGS+ R L+IQ+  SSLPP PST LLRPSG ++PNK AASPAAS S+S I RN SS+SQ+VR ++
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL

A0A5D3BTA8 Retrotransposable element Tf21.8e-2276.54Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR
        MSA+NY MD+QF+QVSR RQGSSP+ LSIQ+GPSSLPP+PSTTLL PS V+ P+K AASPAAS SKSPI RN SSFS+VVR
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVR

A0A5D3D7N3 Retrotransposable element Tf24.8e-2071.43Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL
        MSAENYAMD+QFEQVSR RQGS+ R L+IQ+  SSLPP PST LLRPSG ++PNK AASPAAS S+  ISRN SS+SQ+VR  L
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL

A0A5D3D8C1 Retrotransposable element Tf23.2e-3298.73Show/hide
Query:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQV
        MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQ+
Subjt:  MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCAGAAAATTATGCCATGGATATTCAGTTCGAACAAGTTTCTAGGTGCCGACAAGGTTCTTCCCCAAGAGCTTTGTCTATTCAAACAGGCCCTTCAAGCCTTCC
TCCTTATCCCTCAACAACACTGCTACGCCCTTCTGGAGTTTCATCACCAAACAAGCATGCTGCTTCTCCAGCCGCTTCTTTTTCGAAGTCTCCAATTTCGAGGAATTCTT
CCTCGTTCTCTCAAGTAGTTAGGTCAAGTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCAGAAAATTATGCCATGGATATTCAGTTCGAACAAGTTTCTAGGTGCCGACAAGGTTCTTCCCCAAGAGCTTTGTCTATTCAAACAGGCCCTTCAAGCCTTCC
TCCTTATCCCTCAACAACACTGCTACGCCCTTCTGGAGTTTCATCACCAAACAAGCATGCTGCTTCTCCAGCCGCTTCTTTTTCGAAGTCTCCAATTTCGAGGAATTCTT
CCTCGTTCTCTCAAGTAGTTAGGTCAAGTCTTTAA
Protein sequenceShow/hide protein sequence
MSAENYAMDIQFEQVSRCRQGSSPRALSIQTGPSSLPPYPSTTLLRPSGVSSPNKHAASPAASFSKSPISRNSSSFSQVVRSSL