; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016625 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016625
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-H2 finger protein ATL66
Genome locationchr01:6780314..6780616
RNA-Seq ExpressionIVF0016625
SyntenyIVF0016625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047716.1 retrotransposon protein [Cucumis melo var. makuwa]2.94e-2364.2Show/hide
Query:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHG-RSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS
        GY GF  +DGN++EI  MYS GL+MS DD MGT   R+S+GRN S GSKRKQG Q VET KII +AMEYAN+ L  IA+WS
Subjt:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHG-RSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]1.19e-2253.77Show/hide
Query:  MCYVFGKDRR---------RCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGR-SSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQ
        +CYVFG+D             G   + GY GF  NDGND+EI  MYS GL+MS DD MGT  R +S+GRN S  SKRK   QTVETVKII N++EY NDQ
Subjt:  MCYVFGKDRR---------RCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGR-SSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQ

Query:  LKDIAE
        L  I +
Subjt:  LKDIAE

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]9.55e-2761.8Show/hide
Query:  GVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
        G    EGY GF  +DGNDMEI MMYS G++M  DD MGT   RS+EGR GS GSKRKQG Q VET++II N ME++ND+LK I EW N+
Subjt:  GVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL

KAA0061292.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]3.94e-71100Show/hide
Query:  MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
        MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
Subjt:  MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL

TYK08370.1 retrotransposon protein [Cucumis melo var. makuwa]7.25e-2364.2Show/hide
Query:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHG-RSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS
        GY GF  +DGN++EI  MYS GL+MS DD MGT   R+S+GRN S GSKRKQG Q VET KII +AMEYAN+ L  IA+WS
Subjt:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHG-RSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS

TrEMBL top hitse value%identityAlignment
A0A5A7U0G0 Retrotransposon protein9.2e-1864.2Show/hide
Query:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS
        GY GF  +DGN++EI  MYS GL+MS DD MGT   R+S+GRN S GSKRKQG Q VET KII +AMEYAN+ L  IA+WS
Subjt:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS

A0A5A7UNI7 Retrotransposon protein5.4e-1853.77Show/hide
Query:  MCYVFGKDRR---------RCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGR-SSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQ
        +CYVFG+D             G   + GY GF  NDGND+EI  MYS GL+MS DD MGT  R +S+GRN S  SKRK   QTVETVKII N++EY NDQ
Subjt:  MCYVFGKDRR---------RCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGR-SSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQ

Query:  LKDIAE
        L  I +
Subjt:  LKDIAE

A0A5A7UZF5 RING-H2 finger protein ATL664.0e-53100Show/hide
Query:  MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
        MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
Subjt:  MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL

A0A5A7V469 Retrotransposon protein7.5e-2064.29Show/hide
Query:  EGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL
        EGY GF  +DGNDMEI MMYS G++M  DD MGT   RS+EGR GS GSKRKQG Q VET++II N ME++ND+LK I EW N+
Subjt:  EGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL

A0A5D3CAJ4 Retrotransposon protein9.2e-1864.2Show/hide
Query:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS
        GY GF  +DGN++EI  MYS GL+MS DD MGT   R+S+GRN S GSKRKQG Q VET KII +AMEYAN+ L  IA+WS
Subjt:  GYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTH-GRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTATGTATTTGGGAAAGATCGGAGACGATGTGGGGTCGAATGTGTCGAAGGGTACAATGGATTTCCCACTAACGATGGAAATGATATGGAGATCCATATGATGTA
TAGTTGGGGACTAAACATGTCGCCTGACGACACCATGGGGACACATGGTCGCTCAAGTGAGGGTAGGAATGGTTCAATCGGGTCCAAGAGGAAGCAGGGAGACCAAACGG
TAGAAACTGTGAAAATCATTTGCAATGCAATGGAATATGCAAATGACCAGTTGAAGGACATTGCAGAATGGTCGAATTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTATGTATTTGGGAAAGATCGGAGACGATGTGGGGTCGAATGTGTCGAAGGGTACAATGGATTTCCCACTAACGATGGAAATGATATGGAGATCCATATGATGTA
TAGTTGGGGACTAAACATGTCGCCTGACGACACCATGGGGACACATGGTCGCTCAAGTGAGGGTAGGAATGGTTCAATCGGGTCCAAGAGGAAGCAGGGAGACCAAACGG
TAGAAACTGTGAAAATCATTTGCAATGCAATGGAATATGCAAATGACCAGTTGAAGGACATTGCAGAATGGTCGAATTTATAA
Protein sequenceShow/hide protein sequence
MCYVFGKDRRRCGVECVEGYNGFPTNDGNDMEIHMMYSWGLNMSPDDTMGTHGRSSEGRNGSIGSKRKQGDQTVETVKIICNAMEYANDQLKDIAEWSNL