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IVF0016649 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016649
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:7153926..7154195
RNA-Seq ExpressionIVF0016649
SyntenyIVF0016649
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035574.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.26e-0587.5Show/hide
Query:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
        V LSSF VPDAAQNTEGS SLPP TSLTRTLS
Subjt:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
TYK30962.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.24e-0587.5Show/hide
Query:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
        V LSSF VPDAAQNTEGS SLPP TSLTRTLS
Subjt:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
TrEMBL top hitse value%identityAlignment
A0A5A7SW90 Reverse transcriptase8.8e-0487.5Show/hide
Query:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
        V LSSF VPDAAQNTEGS SLPP TSLTRTLS
Subjt:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
A0A5D3E4V0 Reverse transcriptase8.8e-0487.5Show/hide
Query:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
        V LSSF VPDAAQNTEGS SLPP TSLTRTLS
Subjt:  VSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTCTCTCCTCATTCCGTGTTCCCGACGCAGCCCAGAACACCGAGGGGAGCTACTCACTTCCGCCGTTGACGTCTCTCACTCGAACGTTGTCGGGTGGAGCAAA
AATCCAGACCCGAGCCACGAATCCAGACCAAGTTAAGCCGAGTCGCGAGCTGCGAGCCGCGAGCCACGAGCCGCAAGCCGAGCTGCGAGCCACGAGCCGCAAGCCGAGTC
GTGAGTTGAGCCCAATCGAGGGTGAGCTTAGCCGAGTCAAGTCGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTCTCTCCTCATTCCGTGTTCCCGACGCAGCCCAGAACACCGAGGGGAGCTACTCACTTCCGCCGTTGACGTCTCTCACTCGAACGTTGTCGGGTGGAGCAAA
AATCCAGACCCGAGCCACGAATCCAGACCAAGTTAAGCCGAGTCGCGAGCTGCGAGCCGCGAGCCACGAGCCGCAAGCCGAGCTGCGAGCCACGAGCCGCAAGCCGAGTC
GTGAGTTGAGCCCAATCGAGGGTGAGCTTAGCCGAGTCAAGTCGAGTTGA
Protein sequenceShow/hide protein sequence
MVSLSSFRVPDAAQNTEGSYSLPPLTSLTRTLSGGAKIQTRATNPDQVKPSRELRAASHEPQAELRATSRKPSRELSPIEGELSRVKSS