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IVF0016650 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016650
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionvegetative cell wall protein gp1
Genome locationtig00000135:1429543..1430185
RNA-Seq ExpressionIVF0016650
SyntenyIVF0016650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597407.1 hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia]8.39e-5865.95Show/hide
Query:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY SSS  N V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL
        DFP    P PPGP+ P PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPPG      PEILTSPS  D+
Subjt:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL

KGN56930.1 hypothetical protein Csa_011403 [Cucumis sativus]5.51e-9386.26Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS TSLFSFTLI KTLPSYYP SSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFP+ RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP
        PEP+FP PRPPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP
Subjt:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP

TYK17238.1 hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa]6.65e-117100Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD
        EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD
Subjt:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD

XP_022949559.1 vegetative cell wall protein gp1 [Cucurbita moschata]3.39e-5765.95Show/hide
Query:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY SSS  N V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL
        DFP    P PPGP+ P PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPPG      PEILTSPS  D+
Subjt:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL

XP_022975412.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]2.08e-5866.49Show/hide
Query:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY SSS  N V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP ITP P
Subjt:  MSCTSLFSFTLITKTLPSYYPSSS--NFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL
        DFP    P PPGP+FP PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPPG      PEI TSPS  D+
Subjt:  DFP---DPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL

TrEMBL top hitse value%identityAlignment
A0A0A0L4M0 Uncharacterized protein9.7e-7286.26Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT
        MAVRMS TSLFSFTLI KTLPSYYP SSNF + P LFSHSQFL FNEY  SLS S+LSGDSPEFP+ RPVPPPS PLEIPQFSPPPEIDPSTPSELPSIT
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNF-VTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSIT

Query:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP
        PEP+FP PRPPGPEFPKPP PSPPGIDVP+PPR+PP+IEPPWPGSPVP PEILPPSPPEE+PPRPP PPRPFGPEILTS SP
Subjt:  PEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP

A0A2P6QPT4 Uncharacterized protein2.9e-0740.31Show/hide
Query:  MSCTSLFSFTLITKTLP--SYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPP-PEID-PSTPSELPSI--
        MS  S  SFTLI +T+P  S   +S++  TP L    +   F      L  + LSG   E+P   P          P+FSPP P  D PS P E+P I  
Subjt:  MSCTSLFSFTLITKTLP--SYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPP-PEID-PSTPSELPSI--

Query:  TPEPDFPDPRPPGP----EFPKPPSPSP-PGIDVPVPPRRP---PDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP
        +PE D P   P  P     +P P  P P PG D PVPP +P   PD+  P+P +P+PGP+ LPP PP+ +PP PP      GPEI+  P+P
Subjt:  TPEPDFPDPRPPGP----EFPKPPSPSP-PGIDVPVPPRRP---PDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSP

A0A5D3D162 Uncharacterized protein4.7e-90100Show/hide
Query:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
        MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP
Subjt:  MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITP

Query:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD
        EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD
Subjt:  EPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTD

A0A6J1GD64 vegetative cell wall protein gp11.7e-4465.95Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP +TP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL
        DF   P P PPGP+ P PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEILTSPS  D+
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL

A0A6J1IL49 leucine-rich repeat extensin-like protein 32.0e-4566.49Show/hide
Query:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP
        MSCTS FSFTLI KTLP YY   SSSN V P   SH +FL F   S  LSR +L GDSPEFP+  P+P PS+PLEIPQ S  PEIDP TP ELP ITP P
Subjt:  MSCTSLFSFTLITKTLPSYY--PSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEP

Query:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL
        DF   P P PPGP+FP PP PSPPGIDVP+PP +PPDIEPP PGSPVP P+ILPP PPE  PPRPP      GPEI TSPS  D+
Subjt:  DF---PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDL

SwissProt top hitse value%identityAlignment
Q9FPQ6 Vegetative cell wall protein gp12.9e-0443.65Show/hide
Query:  SPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEE
        SP  P   P  PPS    +P    PP   P+ PS  P + P P  P P PP P  P PPSP+PP    P PP  PP   PP P SP P P   PP+PP  
Subjt:  SPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEPDFPDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEE

Query:  MPPRP----PGPPRPFGPEILTSPSP
        +PP P    P PP P  P     PSP
Subjt:  MPPRP----PGPPRPFGPEILTSPSP

Arabidopsis top hitse value%identityAlignment
AT5G43770.1 proline-rich family protein1.2e-0545.31Show/hide
Query:  GDSP---EFPKSRPVPPPSLPLEIPQFSPPPEIDPS-TPSELPSITPE-PDFPDPRPPGPEFPKPPSPSPPGIDVPVP--PRRPPDIEPPWPGSPVPGPE
        G SP   E P      P   PLE+P+    PEI PS TP E+ ++  + P    P+ PGPEFP PPSPSPP  D P P  P+ PPD+ PP    P P P+
Subjt:  GDSP---EFPKSRPVPPPSLPLEIPQFSPPPEIDPS-TPSELPSITPE-PDFPDPRPPGPEFPKPPSPSPPGIDVPVP--PRRPPDIEPPWPGSPVPGPE

Query:  ILPPSPPEEMPPRPPG--PPRPFGPEIL
        I PP  P      PPG  PP P GP I+
Subjt:  ILPPSPPEEMPPRPPG--PPRPFGPEIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAAGAATGTCCTGCACCTCCCTATTCTCTTTCACTCTCATCACAAAAACGCTTCCTAGTTATTACCCTTCTTCTTCCAATTTCGTCACTCCTCTCCTCTTTTC
TCATTCCCAATTCCTCTCCTTCAATGAATACTCCACGTCTCTCTCGCGCTCTATGCTTTCGGGTGACTCGCCGGAGTTTCCCAAAAGCCGCCCGGTTCCACCGCCTTCTT
TACCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCAAGCACTCCGTCGGAGCTTCCGTCGATAACTCCGGAGCCGGATTTTCCTGATCCCCGGCCGCCA
GGACCAGAGTTTCCGAAGCCTCCGTCGCCGTCTCCTCCGGGAATCGATGTACCGGTACCACCCCGTAGGCCTCCAGATATAGAGCCACCATGGCCTGGTTCGCCAGTACC
AGGACCAGAAATTTTACCGCCGTCGCCACCGGAGGAGATGCCACCTAGACCTCCTGGTCCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGCCGTCTCCAACTGATT
TGTTCCTCCGACGTACATTTAATGCGTACTACTTTAGTTGA
mRNA sequenceShow/hide mRNA sequence
TGTTCCGTTTTGAGAGCTAAAATAACGTTTCAGCTTCCACAGAAGAACTGCCATGGCCGTAAGAATGTCCTGCACCTCCCTATTCTCTTTCACTCTCATCACAAAAACGC
TTCCTAGTTATTACCCTTCTTCTTCCAATTTCGTCACTCCTCTCCTCTTTTCTCATTCCCAATTCCTCTCCTTCAATGAATACTCCACGTCTCTCTCGCGCTCTATGCTT
TCGGGTGACTCGCCGGAGTTTCCCAAAAGCCGCCCGGTTCCACCGCCTTCTTTACCCCTCGAAATTCCACAATTTTCGCCTCCTCCGGAGATTGACCCAAGCACTCCGTC
GGAGCTTCCGTCGATAACTCCGGAGCCGGATTTTCCTGATCCCCGGCCGCCAGGACCAGAGTTTCCGAAGCCTCCGTCGCCGTCTCCTCCGGGAATCGATGTACCGGTAC
CACCCCGTAGGCCTCCAGATATAGAGCCACCATGGCCTGGTTCGCCAGTACCAGGACCAGAAATTTTACCGCCGTCGCCACCGGAGGAGATGCCACCTAGACCTCCTGGT
CCACCTAGACCTTTTGGTCCAGAGATATTGACGTCGCCGTCTCCAACTGATTTGTTCCTCCGACGTACATTTAATGCGTACTACTTTAGTTGA
Protein sequenceShow/hide protein sequence
MAVRMSCTSLFSFTLITKTLPSYYPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDSPEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSELPSITPEPDFPDPRPP
GPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPPRPPGPPRPFGPEILTSPSPTDLFLRRTFNAYYFS