; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016695 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016695
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr05:2622074..2626405
RNA-Seq ExpressionIVF0016695
SyntenyIVF0016695
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057292.1 hypothetical protein E6C27_scaffold280G001330 [Cucumis melo var. makuwa]1.43e-59100Show/hide
Query:  GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF
        GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF
Subjt:  GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF

KGN61515.1 hypothetical protein Csa_006367 [Cucumis sativus]1.24e-1973.33Show/hide
Query:  SANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGF
        S NQT N S +EQYSN YFLHH +NTSIVLV N LTET NY SWSQA+KI L GKN LGF
Subjt:  SANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGF

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]7.85e-1361.4Show/hide
Query:  NPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING
        NP  VEQ++N YFLHH DNTS+VLV + LT+  NYTSWS++I I LT KN +GF++G
Subjt:  NPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING

XP_038887186.1 uncharacterized protein LOC120077373 [Benincasa hispida]2.67e-1567.74Show/hide
Query:  SAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLS
        S +EQY N YFLH  D+TS+VLV N LTE+ NY SWSQA+KIGLT KN LGFING  IP+ S
Subjt:  SAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLS

XP_038902375.1 uncharacterized protein LOC120089012 [Benincasa hispida]9.88e-1950Show/hide
Query:  GPEILPKTNDPK-----HQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPK
        G + LP   +P          L F  + + NP+ +EQY+NSYFLHH D+T++V+V N LTET NYTSWSQ + IGL  KN LGF++G SIP+
Subjt:  GPEILPKTNDPK-----HQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPK

TrEMBL top hitse value%identityAlignment
A0A0A0LI19 Retrotran_gag_3 domain-containing protein1.9e-1373.33Show/hide
Query:  SANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGF
        S NQT N S +EQYSN YFLHH +NTSIVLV N LTE TNY SWSQA+KI L GKN LGF
Subjt:  SANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGF

A0A5D3CPS4 Retrotran_gag_3 domain-containing protein3.5e-44100Show/hide
Query:  GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF
        GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF
Subjt:  GPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF

A0A6J1CMF8 uncharacterized protein LOC1110124686.2e-0948.19Show/hide
Query:  ILPKTNDPKHQLFLFFSANQT----ANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING
        ILP +  P  Q+    S++ T    A  S +E YSN Y+LHH DNTS+VLV + L E  NYTSWS+++ I LT KN +GF++G
Subjt:  ILPKTNDPKHQLFLFFSANQT----ANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING

A0A6J1DIP8 uncharacterized protein LOC1110203992.4e-0857.89Show/hide
Query:  AVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSI
        A+EQY+N YFLHH DNTS+VLV + LT   NYTSWS+++ I LT KN +GF++G  +
Subjt:  AVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSI

A0A6J1DNP7 uncharacterized protein LOC1110220659.6e-1061.4Show/hide
Query:  NPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING
        NP  VEQ++N YFLHH DNTS+VLV + LT+  NYTSWS++I I LT KN +GF++G
Subjt:  NPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFING

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCGAATATCTGAAGATCTCGGCTTATATATATCCAGGTCCTGAAATCCTACCGAAGACCAATGATCCAAAACACCAACTCTTCCTCTTCTTCTCGGCTAATCA
AACGGCGAATCCTTCAGCTGTTGAACAATATTCCAATTCATACTTTCTACACCATCCTGATAATACAAGCATCGTTCTTGTATTGAATTTTCTCACCGAGACGACGAACT
ACACATCTTGGAGTCAAGCCATAAAGATCGGATTAACCGGGAAGAATAATCTTGGCTTCATCAATGGGGGTTCTATTCCTAAATTGTCGTTTTGA
mRNA sequenceShow/hide mRNA sequence
TAAACGTTAGCTTGGTTAATTTTCGTGCACACCTAACAGTGGCCTAAACGTTAGCTTGGTTAATTTTCGTGCACACCTAACAGTGGCCTAAACGTTAGCTTGGTTAATTT
TGGCGCATACCTAACAGTGGCCTAAACATTAGCTTGGTTAATTTTGGCGCACACCTAAAGATGGCCTAAACGTTAGCTAGGTTAATTTTTGCACACCACCTAACAGTGGC
CTAAAAGTTAGGTTAATTTTTCACACCTAACAGTGACCTAAAAGTTAGGTTAATTTTCGCATACCTAATAGTGGCCTAAACCTTAGTTTATTTTCGTATACCTAACGGTG
GCCTAAACGTTAGGATGATGCCAAACATGGGCAGAAATAGAACAAGCAGCTGCAACAGGTACGAAAATTGATGAAACTTGGGATCAATTAGTCTTGCCAATCGTCTTCAA
TTGGGAACTATCCTGTATGATGCATTATTGATTAGCAAAAAAAATCGACAAAAATATCACCATGTTGAAGTAAACAGCTCACAGAGACGAGGTTAAATAAAGGAGAACTG
TGGACGAATAACACATCACGAAGTAACAAGGAAATGGTGATGACAAAATCTCCAATAAAATCGACAGAAATGCAAAAACCATTTGGCAGAGTAATTAACCAACATGTTAT
TTGCAGAATCCAAATTTTTGAAAGCAAAACGATTTCGACAAATGCGATCCAACAATCATGTTGTGATTCAGTAGAGGAAGCCAAGTAAATACTTGTAGCGTGAGTGATGG
GTGTGGCTATAGTAATATATATATATTGCTTTTGATTTTTGCAGCCTGAAGATGGGAACTGAGCATGTTCATCAATTGAGCATATTGATAACTGAAGAAAATATCTGGTG
AATGATTTGGGAAGAAATAGCATTAGTTCTAGCATTGTTTGCAGCAGATTTAGAACCATTATTGGATGCATTTCGAATATCTGAAGATCTCGGCTTATATATATCCAGGT
CCTGAAATCCTACCGAAGACCAATGATCCAAAACACCAACTCTTCCTCTTCTTCTCGGCTAATCAAACGGCGAATCCTTCAGCTGTTGAACAATATTCCAATTCATACTT
TCTACACCATCCTGATAATACAAGCATCGTTCTTGTATTGAATTTTCTCACCGAGACGACGAACTACACATCTTGGAGTCAAGCCATAAAGATCGGATTAACCGGGAAGA
ATAATCTTGGCTTCATCAATGGGGGTTCTATTCCTAAATTGTCGTTTTGAAAATAATAGGGACAAAACTCTAACGTACGGGATAGTAGAGGAGGAGTTGGGAGGCGATAG
AACAAATTATTCAGCAACAAATCAGGAAAGGGGAAGACATTTATTAGAGAATATATCTTAAAATTAAACAAAAGGGTGGCTAAACTAATACAAAATTAAGATATAGTTTG
GAAGGGGATTATATAATAAATACCTTTTCTTTGTTCAAGTCTTTTACAACTGTACATATAAAACCTCTTTGCATTCAATCTTCTGAATAAAAAGCTCTCTGAGAGAAACA
AGTTGCAAAGTGTGTATCACAACTACACTCCCTTTCTGAGTTTCTTTCTACCTTGCATTCATTTTCTGTCCTAAAACATTGATGATTGATTGATATCATCTCGGCATCTC
CCCTTTTCCATCACCACAACTCTTTGATCTTCTTTATTCTTTCTCAGGTTCAAATCACACTAAAGACTTGTGTGTATATATTCTTTTTTGACAACTCACAGTTCCAATAT
AAGGAAAGAACAAAAGAAATGGTATATTCTTCTGTTTGTTACAGCCATAGTATAAAGTAAAAAGATTGTGCATAAATTACTTTCTCACAACAACCTTGAAATGTGAGTCT
TCTCTTTCATTCTTTATTTGTTTTCAATGTGTGATAGTGCAAGCTTTTTCAATACAGAC
Protein sequenceShow/hide protein sequence
MHFEYLKISAYIYPGPEILPKTNDPKHQLFLFFSANQTANPSAVEQYSNSYFLHHPDNTSIVLVLNFLTETTNYTSWSQAIKIGLTGKNNLGFINGGSIPKLSF