CuGenDBv2

Gene ID	IVF0016699
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr09:14392261..14392916
RNA-Seq Expression	IVF0016699
Synteny	IVF0016699
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]

1.37e-34

54.43

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGP L G  VES+  RGS  AGR  +G   FGPR                   I+S   ++ G            V+SG +L NQ ANV+N V+
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        N +NK   DSKSTWASLFGTSSEESL YT PK IGDKIVV PPE+VIDQGI+VWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]

2.84e-95

100

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

KAA0049771.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]

3.98e-48

60.13

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGP LIGP V+S+   GS  AGRRDDGLGSFGPR                         IE  +  N G +E SN ++GC+  NQ+ANV+N V+
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        N +NKQ  DSKSTWASLFGTSSE SLLYTLPK IGDKIVV P E+VIDQGI+VWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]

1.01e-94

99.37

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPE+VIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]

6.67e-99

99.37

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPE+VIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CJ11 uncharacterized protein LOC103501395

1.2e-81

99.37

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPE+VIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

A0A5A7SPE5 Reverse transcriptase domain-containing protein

1.4e-29

54.43

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGP L G  VES+  RGS  AGR  +G   FGPR                   I+S   ++ G            V+SG +L NQ ANV+N V+
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        N +NK   DSKSTWASLFGTSSEESL YT PK IGDKIVV PPE+VIDQGI+VWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

A0A5A7TWG5 Reverse transcriptase domain-containing protein

4.2e-82

100

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

A0A5A7U851 DUF4283 domain-containing protein

1.1e-37

60.13

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGP LIGP V+S+   GS  AGRRDDGLGSFGP                         RIE  +  N G +E SN ++GC+  NQ+ANV+N V+
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        N +NKQ  DSKSTWASLFGTSSE SLLYTLPK IGDKIVV P E+VIDQGI+VWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

A0A5D3D5X6 Reverse transcriptase domain-containing protein

1.2e-81

99.37

Show/hide

Query:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
        MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ
Subjt:  MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQ

Query:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL
        NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPE+VIDQGIKVWENSL
Subjt:  NGINKQLIDSKSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACGGGCTGAACGTAGTTGGGCCTGACTTAATTGGGCCTGATGTTGAATCAGAAGGAAAACGTGGATCTAAAGAAGCTGGTCGGCGAGACGATGGGCTGGGTTCTTT
TGGGCCGCGAAATGAAACTGTAATTGGAAGATGTGGGTCTTCGGTGTGTGGGCAGAAGCTGGATGATATTTCAAGTGGGTCGCGAATTGAATTTGGTGATTTTTTTAATT
CTGGAGAGGATGAGCCGAGCAACGTTTCGTCTGGTTGCGTTTTGAATAATCAGAATGCAAATGTCTCTAATGTTGTTCAGAATGGAATTAATAAGCAGCTTATTGACTCT
AAATCCACATGGGCTTCGCTATTTGGGACCTCTTCTGAAGAATCCCTGCTCTATACTCTGCCCAAAATTATTGGGGATAAAATTGTAGTCACTCCACCTGAAAAGGTTAT
CGATCAAGGAATTAAAGTGTGGGAAAATTCTTTGACGGTCAAAATCAGTGGAGTGGATTCTTTCGCGTGGACCATGGCATCTCGATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDGLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISSGSRIEFGDFFNSGEDEPSNVSSGCVLNNQNANVSNVVQNGINKQLIDS
KSTWASLFGTSSEESLLYTLPKIIGDKIVVTPPEKVIDQGIKVWENSLTVKISGVDSFAWTMASR

IVF0016699 (gene) of Melon (IVF77) v1 genome