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IVF0016746 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016746
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionglycine-rich RNA-binding protein 2-like
Genome locationchr01:2069360..2069950
RNA-Seq ExpressionIVF0016746
SyntenyIVF0016746
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608571.1 hypothetical protein SDJN03_01913, partial [Cucurbita argyrosperma subsp. sororia]4.08e-7273.71Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        +GW        LV     +YGSRA EGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN GGGGG  YGWGWG GGGGGGGGGG  GGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
        GGGGWGWGGGGGGWWKWGCGG+PK  + G     GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR

KAG7037889.1 hypothetical protein SDJN02_01520, partial [Cucurbita argyrosperma subsp. argyrosperma]3.19e-7176.22Show/hide
Query:  VILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGG---WGWGG
        +     +YGSRA EGL NG      TFLTFSELP+ NAGE RNSS NT+TVEVSKQN GGGGG  YGWGWG GGGGGGGGGGGGGGGGGGGG   WGWGG
Subjt:  VILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGG---WGWGG

Query:  GGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
        GGGGWWKWGCGG+PK  + G     GRRKNV RK++YNE+DY MGEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R
Subjt:  GGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR

XP_008455258.1 PREDICTED: keratin, type II cytoskeletal 1 [Cucumis melo]2.79e-124100Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
        GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
Subjt:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP

XP_011659711.1 keratin, type II cytoskeletal 2 epidermal [Cucumis sativus]3.47e-10890.31Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQNGGGGGGG YGWGWGSGGGGGGGGG   GGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
        GGGGWGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP

XP_022940700.1 glycine-rich RNA-binding protein 2-like [Cucurbita moschata]7.92e-7070Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSRA EGL NG      TFLTFSELP  NAGE RNSS NT+TVEVSKQN GGGGG  YGWGWG GGGGGGGGG 
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGG

Query:  GGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
          GGGGGGGGWGWGGGGGGWWKWGCGG+PK  + G     GRRKNV RK++YNE+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR

TrEMBL top hitse value%identityAlignment
A0A0A0K766 Uncharacterized protein3.2e-8390.31Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVI GSRAAEGLGNGSMP+NVTFLTFSELPQRNAGERRNSSSN++TVEVSKQN GGGGGGGYGWGWGS   GGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
        GGGGWGWGGGGGGWWKWGCGG+PK E+VGRRDDNG  +NVK K+MY+EKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHC R P
Subjt:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP

A0A1S3C029 keratin, type II cytoskeletal 11.3e-95100Show/hide
Query:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
        MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG
Subjt:  MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGG

Query:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
        GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP
Subjt:  GGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP

A0A5B6X6H1 RNA-binding protein cabeza-like1.1e-3072.66Show/hide
Query:  GGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGW-GGGGGGWWKWGCGGRPKFEKVGRRDDNGR--RKNVKRKKMYNEKDYRMGEFAQCMVKGRCR
        GGGGGGGGYGWGW     GGGGGGGGGGGGGGGGGWGW GGGGGGW+KWGCGGR   +  GR  D G   R    RK+ +N++DY+MGEFAQC V+GRCR
Subjt:  GGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGW-GGGGGGWWKWGCGGRPKFEKVGRRDDNGR--RKNVKRKKMYNEKDYRMGEFAQCMVKGRCR

Query:  GMRLDCPLHCGGPCFYDCRYMCKAHCTR
        GMRLDCPLHCGGPC YDC++MCKAHC R
Subjt:  GMRLDCPLHCGGPCFYDCRYMCKAHCTR

A0A6J1FRC8 glycine-rich RNA-binding protein 2-like9.2e-5471.5Show/hide
Query:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGG
        +G +N  ++ A+  +  V      +YGSR AEGL NG      TFLTFSELP  NAGE RNSS NT+TVEVSKQN   GGGGGYGWGW   GGGGGGGGG
Subjt:  MGWENPIKLSALVILATV------IYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGG

Query:  GGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
        GGGGGGGGGGWGWGGGGGGWWKWGCGG+P   K GRR   GRRKNV RK++YNE+DY +GEFA+CMVKGRCRGMRLDCPLHCGGPCFYDCR+MCKAHC R
Subjt:  GGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR

A0A7J7HUV4 Uncharacterized protein1.4e-3066.21Show/hide
Query:  RNSSSNTSTVEVSKQN----GGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEK
        +  ++ T  V V  +N    GGGGGGG +GWGWG GGGGGGGGGGGGGGGGGGGGWGWGGGGGGWW WGC  RP       R  NG   +++ K+++N +
Subjt:  RNSSSNTSTVEVSKQN----GGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGWGGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEK

Query:  DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
        DY++GEFAQCMV+GRCRGMRLDCPLHCGGPCFYDC++MCKAHC R
Subjt:  DYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G75550.1 glycine-rich protein6.1e-1856.34Show/hide
Query:  SSSNTSTVEVSKQNGGGGGGGGYGWGW-GSGGGGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYR
        +S+ T  V   K+    GG G Y WGW G GGGGGGGGGGGGGGGGGGGGWGW  GGGGGGW+KWGCGG  K +  GR    GR + VKR          
Subjt:  SSSNTSTVEVSKQNGGGGGGGGYGWGW-GSGGGGGGGGGGGGGGGGGGGGWGW--GGGGGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYR

Query:  MGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR
          E+A+C  +G+C G RL+CP HCGG CFYDC ++CK HC R
Subjt:  MGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATAAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCGGGGGAGAGGAGAAACAGTTCTAGCAATACTAGTACAGTTGAGGTCAGCAAGCAGAACGGGGGAGGTGGCG
GTGGCGGTGGCTATGGATGGGGATGGGGCAGCGGTGGTGGAGGAGGAGGAGGAGGAGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGAGGATGGGGATGGGGAGGAGGT
GGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACGGCCAAAATTCGAGAAAGTAGGACGACGCGACGATAACGGACGAAGAAAAAATGTGAAGAGAAAGAAAATGTACAA
CGAGAAAGATTATAGAATGGGAGAATTTGCACAATGCATGGTGAAAGGAAGGTGCAGAGGAATGAGATTAGATTGTCCACTCCACTGCGGCGGACCTTGCTTCTATGATT
GTCGATACATGTGTAAAGCTCACTGTACTCGACATCCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGGAAAATCCAATCAAATTAAGTGCTTTGGTGATTTTAGCAACAGTGATTTATGGGTCAAGAGCTGCTGAAGGTTTAGGAAATGGAAGTATGCCCATAAATGT
AACTTTCTTAACATTCTCAGAGCTGCCACAGAGGAATGCGGGGGAGAGGAGAAACAGTTCTAGCAATACTAGTACAGTTGAGGTCAGCAAGCAGAACGGGGGAGGTGGCG
GTGGCGGTGGCTATGGATGGGGATGGGGCAGCGGTGGTGGAGGAGGAGGAGGAGGAGGAGGTGGAGGTGGTGGTGGTGGTGGTGGTGGAGGATGGGGATGGGGAGGAGGT
GGAGGTGGGTGGTGGAAATGGGGTTGTGGAGGACGGCCAAAATTCGAGAAAGTAGGACGACGCGACGATAACGGACGAAGAAAAAATGTGAAGAGAAAGAAAATGTACAA
CGAGAAAGATTATAGAATGGGAGAATTTGCACAATGCATGGTGAAAGGAAGGTGCAGAGGAATGAGATTAGATTGTCCACTCCACTGCGGCGGACCTTGCTTCTATGATT
GTCGATACATGTGTAAAGCTCACTGTACTCGACATCCGTAA
Protein sequenceShow/hide protein sequence
MGWENPIKLSALVILATVIYGSRAAEGLGNGSMPINVTFLTFSELPQRNAGERRNSSSNTSTVEVSKQNGGGGGGGGYGWGWGSGGGGGGGGGGGGGGGGGGGGWGWGGG
GGGWWKWGCGGRPKFEKVGRRDDNGRRKNVKRKKMYNEKDYRMGEFAQCMVKGRCRGMRLDCPLHCGGPCFYDCRYMCKAHCTRHP