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IVF0016748 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016748
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAlanine--tRNA ligase-like
Genome locationchr04:13091926..13092980
RNA-Seq ExpressionIVF0016748
SyntenyIVF0016748
Gene Ontology termsGO:0070143 - mitochondrial alanyl-tRNA aminoacylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0004813 - alanine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR018164 - Alanyl-tRNA synthetase, class IIc, N-terminal
IPR018165 - Alanyl-tRNA synthetase, class IIc, core domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038022.1 alanine--tRNA ligase-like [Cucumis melo var. makuwa]1.15e-89100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

KAA0042935.1 alanine--tRNA ligase-like [Cucumis melo var. makuwa]1.24e-11097.42Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQ+YKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEA
        LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKS+A
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEA

TYK20575.1 alanine--tRNA ligase-like [Cucumis melo var. makuwa]3.90e-91100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

XP_008461868.1 PREDICTED: alanine--tRNA ligase-like [Cucumis melo]1.09e-8798.41Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

XP_016900399.1 PREDICTED: alanine--tRNA ligase-like [Cucumis melo]1.25e-92100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

TrEMBL top hitse value%identityAlignment
A0A1S4DWP3 alanine--tRNA ligase-like6.3e-72100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

A0A5A7T3F6 Alanine--tRNA ligase-like6.3e-72100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

A0A5A7TNE7 Alanine--tRNA ligase-like6.3e-8897.42Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQ+YKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEA
        LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKS+A
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEA

A0A5D3C1B3 Alanine--tRNA ligase1.2e-7098.41Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

A0A5D3DAI6 Alanine--tRNA ligase-like6.3e-72100Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        LAPDNEARDIWLKFLPAERVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

SwissProt top hitse value%identityAlignment
O01541 Alanine--tRNA ligase, cytoplasmic1.2e-5170.87Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKP+FLG  DPN+ L+KL RA NTQKCI AGG+HNDLDDVGKD YHHT+FEMLGNWSFGDYFKKE ITWAWELLT VY +P +R+Y + FGGDE  G
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKF-LPAERVLPFGCK
        +  D+EARDIW    +P ER+L FG K
Subjt:  LAPDNEARDIWLKF-LPAERVLPFGCK

P36428 Alanine--tRNA ligase5.9e-6789.68Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        L PDNEARDIWLK LP+ RVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

Q54Y20 Alanine--tRNA ligase, cytoplasmic2.6e-5473.81Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLG V+P +  +KL RA N+QKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFG+YFKKEAITWAWELLT+VYKL  +R+Y TYF GD + G
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        L  D EA+++WL++LP ERVLPFG K
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

Q5A8K2 Alanine--tRNA ligase1.5e-4969.92Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQ+KPIFLGTVDP +  + L RA N+QKCI AGG+HNDL+DVG+D+YHHTFFEMLGNWSFGDYFKKEAI ++WELLT+VY L  DR+Y TYFGGDEK G
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKF-LPAERVLP
        L PD EA++ WLK  +P + +LP
Subjt:  LAPDNEARDIWLKF-LPAERVLP

Q9VLM8 Alanine--tRNA ligase, cytoplasmic3.2e-4968.5Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQFKPIFLGT DPN+ +SK  R  NTQKCI AGG+HNDLDDVGKD YHHTFFEMLGNWSFGDYFKKE  +WAWE LTQ   LP DR+Y TYFGGD  +G
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKF-LPAERVLPFGCK
        L PD E + +WL   L  E +LP   K
Subjt:  LAPDNEARDIWLKF-LPAERVLPFGCK

Arabidopsis top hitse value%identityAlignment
AT1G50200.1 Alanyl-tRNA synthetase4.2e-6889.68Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        L PDNEARDIWLK LP+ RVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

AT1G50200.2 Alanyl-tRNA synthetase4.2e-6889.68Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG
        MNQ+KPIFLGT DPNT LSKL+RACNTQKCI AGG+HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAI WAWELLT+VY LPTDRIYATYFGGDEKAG
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAG

Query:  LAPDNEARDIWLKFLPAERVLPFGCK
        L PDNEARDIWLK LP+ RVLPFGCK
Subjt:  LAPDNEARDIWLKFLPAERVLPFGCK

AT5G22800.1 Alanyl-tRNA synthetase, class IIc4.1e-2353.54Show/hide
Query:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKA
        M QFKPIFLG V       ++  A   Q+CI    R NDL++VGK   HHTFFEMLGN+SFGDYFKKEAI WAWEL T  + LP +R++ + +  D++A
Subjt:  MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACA
CAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCT
GGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATA
TGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCT
TGTTATCTATCTGAAATCTGAAGCTGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGTTCAAGCCCATTTTTTTGGGTACTGTTGATCCTAACACGTCTTTGAGCAAGCTCACCCGAGCTTGTAATACTCAGAAATGTATTCATGCTGGTGGGAGACA
CAATGATCTTGATGACGTTGGAAAAGACACGTATCACCATACTTTCTTTGAGATGCTTGGAAATTGGTCATTTGGGGATTACTTTAAAAAGGAAGCCATCACATGGGCCT
GGGAACTTCTTACTCAGGTTTATAAGCTTCCCACAGATCGAATTTATGCTACCTACTTCGGTGGAGATGAGAAAGCTGGTCTTGCACCTGATAATGAGGCTAGGGACATA
TGGCTGAAGTTTTTGCCTGCTGAACGTGTCTTACCTTTTGGCTGCAAAGTAAGATTACCTAACAATTTCTCTTTCTTTTTTGGTCTTGCAAGCTACAACTACAAATGTCT
TGTTATCTATCTGAAATCTGAAGCTGAAGCTTCAATTATCAAAGAAAACAAAAATCAGTGA
Protein sequenceShow/hide protein sequence
MNQFKPIFLGTVDPNTSLSKLTRACNTQKCIHAGGRHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTQVYKLPTDRIYATYFGGDEKAGLAPDNEARDI
WLKFLPAERVLPFGCKVRLPNNFSFFFGLASYNYKCLVIYLKSEAEASIIKENKNQ