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IVF0016753 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016753
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr02:16131158..16131594
RNA-Seq ExpressionIVF0016753
SyntenyIVF0016753
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046551.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.60e-30100Show/hide
Query:  MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM
        MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM
Subjt:  MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM

KAE8652979.1 hypothetical protein Csa_021104, partial [Cucumis sativus]2.00e-2888.52Show/hide
Query:  MEKLLLLLVFHANAPPSTALPPP-APAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM
        ME+LLLLLVFHANAPPSTA PPP APAQLKRIHIGGALSPF FTYSVAVKYVA+I WD LM
Subjt:  MEKLLLLLVFHANAPPSTALPPP-APAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM

KAG6587964.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]6.74e-1162.9Show/hide
Query:  MEKLLLLLVFHA-----NAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWD
        ME+LLL+L FHA     NAPPS+A PP A A LKR HIG A SP IFTYS AVK   +I WD
Subjt:  MEKLLLLLVFHA-----NAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWD

KAG7021854.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]6.73e-1162.9Show/hide
Query:  MEKLLLLLVFHA-----NAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWD
        ME+LLL+L FHA     NAPPS+A PP A A LKR HIG A SP IFTYS AVK   +I WD
Subjt:  MEKLLLLLVFHA-----NAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWD

TrEMBL top hitse value%identityAlignment
A0A5A7TZ04 Pentatricopeptide repeat-containing protein6.8e-25100Show/hide
Query:  MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM
        MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM
Subjt:  MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCTGCTTCTACTGCTCGTCTTTCATGCAAATGCACCGCCGTCAACTGCTCTTCCTCCTCCTGCACCTGCCCAGCTGAAAAGAATTCATATTGGAGGA
GCTTTATCTCCATTCATCTTCACTTATTCAGTGGCAGTGAAATACGTTGCTATAATAAATTGGGATTTTCTGATGGTGAGGCGAAAGTTTGAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCTGCTTCTACTGCTCGTCTTTCATGCAAATGCACCGCCGTCAACTGCTCTTCCTCCTCCTGCACCTGCCCAGCTGAAAAGAATTCATATTGGAGGA
GCTTTATCTCCATTCATCTTCACTTATTCAGTGGCAGTGAAATACGTTGCTATAATAAATTGGGATTTTCTGATGGTGAGGCGAAAGTTTGAAGAGTAG
Protein sequenceShow/hide protein sequence
MEKLLLLLVFHANAPPSTALPPPAPAQLKRIHIGGALSPFIFTYSVAVKYVAIINWDFLMVRRKFEE