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IVF0016782 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016782
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr12:3394106..3404763
RNA-Seq ExpressionIVF0016782
SyntenyIVF0016782
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036989.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.61e-5984.21Show/hide
Query:  MIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS
        MIMEIIREGPLAYCPPVLD                  DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS
Subjt:  MIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS

Query:  CSTAKEAWRTLEVA
        CSTAKEAWRTLEVA
Subjt:  CSTAKEAWRTLEVA

KAA0062665.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.66e-4782.8Show/hide
Query:  RAGCMIMEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEA
        RAGC IM+IIREGP A CPPVLDDGRAW+ALVA YEP MITVDG+SIPK EVDW +A +Q S+GNARALNAIFNGVDLNVFKLINSCST KEA
Subjt:  RAGCMIMEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEA

KAA0065827.1 gag-pol polyprotein [Cucumis melo var. makuwa]9.35e-4579.79Show/hide
Query:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA
        M IIREGP    PPV+DDGRAW+ALVA YEPLMITVDGV I KPEVDW DA ++ S+GNARALNAIFNG DLNVFKLINSCSTAKEAWR +EVA
Subjt:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA

TYJ97129.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.79e-4266.96Show/hide
Query:  MEIIREGPLAYCPPVLDD------------------GRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCS
        MEIIREG  A  PP+LDD                  G+AW+AL+A Y+P MITV+GVS+PKPEVDW DA KQ S+GNARALNAIFNG+DLNVFKLINSCS
Subjt:  MEIIREGPLAYCPPVLDD------------------GRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCS

Query:  TAKEAWRTLEVA
        TAKEAW+TLEVA
Subjt:  TAKEAWRTLEVA

XP_016902964.1 PREDICTED: uncharacterized protein LOC107991959 [Cucumis melo]1.69e-4477.66Show/hide
Query:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA
        MEIIREG     PPVLDDG+AW+ LVA YEP MITVDGVS+PKPEVDW DA +Q S+GNARALNAIFNG+DLNVFK IN CST KEAWR LEVA
Subjt:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA

TrEMBL top hitse value%identityAlignment
A0A1S4E413 uncharacterized protein LOC1079919594.1e-3477.66Show/hide
Query:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA
        MEIIREG     PPVLDDG+AW+ LVA YEP MITVDGVS+PKPEVDW DA +Q S+GNARALNAIFNG+DLNVFK IN CST KEAWR LEVA
Subjt:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA

A0A5A7T6I4 Gag-pol polyprotein5.2e-4584.21Show/hide
Query:  MIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS
        MIMEIIREGPLAYCPPVLD                  DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS
Subjt:  MIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINS

Query:  CSTAKEAWRTLEVA
        CSTAKEAWRTLEVA
Subjt:  CSTAKEAWRTLEVA

A0A5A7U3P0 Gag-pol polyprotein3.2e-3466.67Show/hide
Query:  AGCMIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKL
        AGCMIMEIIREG     PPVLD                  DG+AW+ LVA YEP MITVDGVS+PKPEVDW DA +Q S+GNARALNAIFNG+DLNVFK 
Subjt:  AGCMIMEIIREGPLAYCPPVLD------------------DGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKL

Query:  INSCSTAKEAWRTLEVA
        IN CST KEAWR LEVA
Subjt:  INSCSTAKEAWRTLEVA

A0A5A7V9V9 Gag-pol polyprotein2.0e-3682.8Show/hide
Query:  RAGCMIMEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEA
        RAGC IM+IIREGP A CPPVLDDGRAW+ALVA YEP MITVDG+SIPK EVDW +A +Q S+GNARALNAIFNGVDLNVFKLINSCST KEA
Subjt:  RAGCMIMEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEA

A0A5A7VFI7 Gag-pol polyprotein8.4e-3579.79Show/hide
Query:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA
        M IIREGP    PPV+DDGRAW+ALVA YEPLMITVDGV I KPEVDW DA ++ S+GNARALNAIFNG DLNVFKLINSCSTAKEAWR +EVA
Subjt:  MEIIREGPLAYCPPVLDDGRAWKALVACYEPLMITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCGTGGACGGGGTGCACGACTTTGCTGACTTCAGTGGACACATCAACAAAGTCGTGGACCTCGTCTACGACTTTTGCCTAGTTGTGGACGGAGTGCACGACTT
TGCTGACTTCAGTGGACACATCAGCAAAGTCATGGATCTCGTCTACGACTTTTGCCTAGTCGTAGAGAAGAAGCTTTGGATCGAAGAAGAAGTTGAGAACTACAAAAGAG
CGGGTTGCATGATCATGGAGATAATCAGAGAGGGACCTTTAGCTTATTGTCCTCCTGTACTGGATGATGGGAGAGCTTGGAAGGCTCTTGTGGCTTGTTATGAACCTCTG
ATGATTACTGTGGATGGTGTATCAATTCCGAAACCTGAGGTTGATTGGATTGATGCTGGAAAGCAAGTATCAATTGGGAATGCTAGAGCTTTAAATGCAATATTCAATGG
TGTGGACCTAAATGTGTTCAAACTTATAAACTCATGTAGTACTGCCAAAGAAGCATGGAGAACATTGGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCGTGGACGGGGTGCACGACTTTGCTGACTTCAGTGGACACATCAACAAAGTCGTGGACCTCGTCTACGACTTTTGCCTAGTTGTGGACGGAGTGCACGACTT
TGCTGACTTCAGTGGACACATCAGCAAAGTCATGGATCTCGTCTACGACTTTTGCCTAGTCGTAGAGAAGAAGCTTTGGATCGAAGAAGAAGTTGAGAACTACAAAAGAG
CGGGTTGCATGATCATGGAGATAATCAGAGAGGGACCTTTAGCTTATTGTCCTCCTGTACTGGATGATGGGAGAGCTTGGAAGGCTCTTGTGGCTTGTTATGAACCTCTG
ATGATTACTGTGGATGGTGTATCAATTCCGAAACCTGAGGTTGATTGGATTGATGCTGGAAAGCAAGTATCAATTGGGAATGCTAGAGCTTTAAATGCAATATTCAATGG
TGTGGACCTAAATGTGTTCAAACTTATAAACTCATGTAGTACTGCCAAAGAAGCATGGAGAACATTGGAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MEVVDGVHDFADFSGHINKVVDLVYDFCLVVDGVHDFADFSGHISKVMDLVYDFCLVVEKKLWIEEEVENYKRAGCMIMEIIREGPLAYCPPVLDDGRAWKALVACYEPL
MITVDGVSIPKPEVDWIDAGKQVSIGNARALNAIFNGVDLNVFKLINSCSTAKEAWRTLEVA