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IVF0016789 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016789
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistone H2B.3-like
Genome locationchr02:6213460..6213714
RNA-Seq ExpressionIVF0016789
SyntenyIVF0016789
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045476.1 histone H2B.3-like [Cucumis melo var. makuwa]6.65e-2569.74Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVE
        M PRRGA RGG  G+GAGRTQPEEQPA Q A P   VTQ DL  ME+RYQDMLRDAL PFHA Q+T  AP  AL+E
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVE

KAA0056050.1 pol protein [Cucumis melo var. makuwa]1.25e-4395.24Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC
        MSPRRGASRGGRRGKGAGRTQ EEQPAAQAAIPITSVTQ DLTTME+RYQDMLRDALTPFH VQQTSPAPAQALVEPRSCQTNC
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC

TYK07609.1 histone H2B.3-like [Cucumis melo var. makuwa]1.72e-2473.91Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPA
        MS RRGA +GGRRGKGAGRTQPEEQP  + A P   VTQ DL TMEQRYQDMLRDAL PF+A QQT  A
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPA

TYK21767.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.60e-2872.15Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRS
        M P +GA RGGR G+GAGRT+ EEQPAAQAA P TSVTQ D TTME  YQDM RDAL PFHA QQT PAPAQ  VEP++
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRS

TYK27734.1 pol protein [Cucumis melo var. makuwa]3.95e-4498.81Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC
        MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPA AQALVEPRSCQTNC
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC

TrEMBL top hitse value%identityAlignment
A0A5A7SLV4 Gag protease polyprotein9.1e-1968.67Show/hide
Query:  MSPRRGA-SRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQT
        M PR+GA  RGGR G+GAGRTQPEEQPA QAA P T VTQ DL  ME+RYQDMLRDALTPFHA Q    AP Q  V P   QT
Subjt:  MSPRRGA-SRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQT

A0A5A7TTM9 Histone H2B.3-like1.0e-1769.74Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVE
        M PRRGA RGG  G+GAGRTQPEEQPA Q A P   VTQ DL  ME+RYQDMLRDAL PFHA Q+T  AP  AL+E
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVE

A0A5A7ULM7 Pol protein2.6e-3495.24Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC
        MSPRRGASRGGRRGKGAGRTQ EEQPAAQAAIPITSVTQ DLTTME+RYQDMLRDALTPFH VQQTSPAPAQALVEPRSCQTNC
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC

A0A5D3DDK7 Gag-protease polyprotein9.8e-2172.15Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRS
        M P +GA RGGR G+GAGRT+ EEQPAAQAA P TSVTQ D TTME  YQDM RDAL PFHA QQT PAPAQ  VEP++
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRS

A0A5D3DW58 Pol protein3.7e-3698.81Show/hide
Query:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC
        MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPA AQALVEPRSCQTNC
Subjt:  MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCACGTAGAGGTGCAAGTAGAGGTGGTAGGAGAGGTAAAGGAGCTGGACGTACCCAGCCTGAAGAGCAACCTGCTGCGCAAGCTGCCATCCCCATAACATCTGT
CACTCAAGAAGACCTCACTACAATGGAGCAAAGGTACCAAGATATGCTGAGAGATGCATTGACACCGTTTCATGCTGTTCAACAAACCTCGCCAGCCCCTGCTCAGGCCC
TAGTTGAACCCAGATCGTGCCAGACCAACTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCACGTAGAGGTGCAAGTAGAGGTGGTAGGAGAGGTAAAGGAGCTGGACGTACCCAGCCTGAAGAGCAACCTGCTGCGCAAGCTGCCATCCCCATAACATCTGT
CACTCAAGAAGACCTCACTACAATGGAGCAAAGGTACCAAGATATGCTGAGAGATGCATTGACACCGTTTCATGCTGTTCAACAAACCTCGCCAGCCCCTGCTCAGGCCC
TAGTTGAACCCAGATCGTGCCAGACCAACTGTTAG
Protein sequenceShow/hide protein sequence
MSPRRGASRGGRRGKGAGRTQPEEQPAAQAAIPITSVTQEDLTTMEQRYQDMLRDALTPFHAVQQTSPAPAQALVEPRSCQTNC