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IVF0016842 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016842
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr11:18998663..19000777
RNA-Seq ExpressionIVF0016842
SyntenyIVF0016842
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570707.1 Protein TRM32, partial [Cucurbita argyrosperma subsp. sororia]2.91e-0569.44Show/hide
Query:  QPFPEVEDMEFGPGEGTCAGTKGTRILQFWVLWVST
        Q +PEVE MEFGPG+ T +GTK TRI   WVLWVST
Subjt:  QPFPEVEDMEFGPGEGTCAGTKGTRILQFWVLWVST
KAG7010553.1 hypothetical protein SDJN02_27347 [Cucurbita argyrosperma subsp. argyrosperma]4.09e-0670.59Show/hide
Query:  FPEVEDMEFGPGEGTCAGTKGTRILQFWVLWVST
        +PEVE MEFGPG+ T +GTK TRI   WVLWVST
Subjt:  FPEVEDMEFGPGEGTCAGTKGTRILQFWVLWVST
KGN47177.2 hypothetical protein Csa_020828 [Cucumis sativus]2.73e-3971.3Show/hide
Query:  MLRLTIHGRLENWPYLRQTCGCEQPLNFPAMENCFVGSHGMAVYADANLLGLKVTYRLGMSKQKVNKRQ--QPFPEVEDMEFGPGEGTCAGTKGTRILQF
        MLRLTIHGRLENW  LRQTCGCEQ LNFPAMENC VGSHGMAV          V  +L        K +  +PFPEVEDMEFGPGE TCAGTKGTRILQF
Subjt:  MLRLTIHGRLENWPYLRQTCGCEQPLNFPAMENCFVGSHGMAVYADANLLGLKVTYRLGMSKQKVNKRQ--QPFPEVEDMEFGPGEGTCAGTKGTRILQF

Query:  WVLWVSTV
        WVLWVSTV
Subjt:  WVLWVSTV
XP_031743531.1 uncharacterized protein LOC105435809 isoform X1 [Cucumis sativus]9.54e-0996.55Show/hide
Query:  MEFGPGEGTCAGTKGTRILQFWVLWVSTV
        MEFGPGE TCAGTKGTRILQFWVLWVSTV
Subjt:  MEFGPGEGTCAGTKGTRILQFWVLWVSTV
TrEMBL top hitse value%identityAlignment
A0A0A0KCA1 Uncharacterized protein1.0e-5478.62Show/hide
Query:  MLRLTIHGRLENWPYLRQTCGCEQPLNFPAMENCFVGSHGMA---VYADANLLGLKVTYRLGMSKQKVNKRQQPFPEVEDMEFGPGEGTCAGTKGTRILQ
        MLRLTIHGRLENW  LRQTCGCEQ LNFPAMENC VGSHGMA   VYADAN   LKVTYR GMSKQK NK Q+PFPEVEDMEFGPGE TCAGTKGTRILQ
Subjt:  MLRLTIHGRLENWPYLRQTCGCEQPLNFPAMENCFVGSHGMA---VYADANLLGLKVTYRLGMSKQKVNKRQQPFPEVEDMEFGPGEGTCAGTKGTRILQ

Query:  FWVLWVSTVRFHYLPSSERKSHLCSFFFLLLFKDDNKQKRLSLIS
        FWVLWVST      P  E  + +  FFFLLLFKDD+KQKRLSLIS
Subjt:  FWVLWVSTVRFHYLPSSERKSHLCSFFFLLLFKDDNKQKRLSLIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGGCTCACGATCCATGGCCGATTGGAAAATTGGCCCTATCTTCGTCAAACTTGCGGTTGTGAGCAACCGCTGAATTTTCCGGCCATGGAAAATTGCTTCGTTGG
AAGCCATGGCATGGCTGTTTACGCCGATGCAAATCTTTTAGGGTTGAAGGTTACGTATAGGCTCGGAATGTCTAAACAAAAAGTCAACAAACGCCAACAACCGTTCCCTG
AGGTCGAGGATATGGAGTTTGGACCAGGCGAAGGGACTTGTGCTGGGACCAAGGGGACTAGGATTCTCCAATTTTGGGTGTTGTGGGTCTCCACGGTTAGATTTCATTAC
TTGCCCTCTTCTGAAAGAAAATCCCACCTTTGTTCTTTCTTCTTCCTATTGCTATTTAAGGATGATAACAAACAAAAGAGGCTGAGCTTAATTTCCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGGCTCACGATCCATGGCCGATTGGAAAATTGGCCCTATCTTCGTCAAACTTGCGGTTGTGAGCAACCGCTGAATTTTCCGGCCATGGAAAATTGCTTCGTTGG
AAGCCATGGCATGGCTGTTTACGCCGATGCAAATCTTTTAGGGTTGAAGGTTACGTATAGGCTCGGAATGTCTAAACAAAAAGTCAACAAACGCCAACAACCGTTCCCTG
AGGTCGAGGATATGGAGTTTGGACCAGGCGAAGGGACTTGTGCTGGGACCAAGGGGACTAGGATTCTCCAATTTTGGGTGTTGTGGGTCTCCACGGTTAGATTTCATTAC
TTGCCCTCTTCTGAAAGAAAATCCCACCTTTGTTCTTTCTTCTTCCTATTGCTATTTAAGGATGATAACAAACAAAAGAGGCTGAGCTTAATTTCCTTTTAA
Protein sequenceShow/hide protein sequence
MLRLTIHGRLENWPYLRQTCGCEQPLNFPAMENCFVGSHGMAVYADANLLGLKVTYRLGMSKQKVNKRQQPFPEVEDMEFGPGEGTCAGTKGTRILQFWVLWVSTVRFHY
LPSSERKSHLCSFFFLLLFKDDNKQKRLSLISF