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IVF0016851 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016851
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pro-like protein
Genome locationchr12:4952051..4952747
RNA-Seq ExpressionIVF0016851
SyntenyIVF0016851
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037781.1 uncharacterized protein E6C27_scaffold471G00160 [Cucumis melo var. makuwa]1.27e-9081.56Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        +RNVK+HCK+QDV++ I AKD+EYKKLVTD+EANEFLK+VKQSEYKII+QMHH+PAQISLLSLF NS+PH KV LDILNK H G DI VEK SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        SSNSIVF++D IPPEGLGHTKALHIQVK K YVIARVLVDNGS LN MPKSTLLKLP+DMS+IKSS+MVV+AFDGS RE
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

KAA0051906.1 Gag-pro-like protein [Cucumis melo var. makuwa]6.00e-9685.56Show/hide
Query:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI
        MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQ+                         PHPKVQLDILNKEHYGDDILVEKLSGIIGNI
Subjt:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI

Query:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
Subjt:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

KAA0065724.1 uncharacterized protein E6C27_scaffold37G00080 [Cucumis melo var. makuwa]4.71e-9281.82Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        +RNVKEHC++QDVE+PI AKD+EYKKLVTD+EANEFLKIVKQSE KIIEQMHH+ A+ISLLSLF NS+PH +V LDILNK H G DI VEK SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGS
        SSNSIV ++DEIPPEGLGHTKALHIQVK K YVIARVLVDN STLN MPKSTLLKLP+DMS+IKSS+MVV+AFDGS
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGS

TYJ99882.1 Gag-pro-like protein [Cucumis melo var. makuwa]1.07e-9785.56Show/hide
Query:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI
        MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQ+                         PHPKVQLDILNKEHYGDDILVEKLSGIIGNI
Subjt:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI

Query:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
Subjt:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

TYK27304.1 uncharacterized protein E5676_scaffold1784G00170 [Cucumis melo var. makuwa]1.27e-9081.56Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        +RNVK+HCK+QDV++ I AKD+EYKKLVTD+EANEFLK+VKQSEYKII+QMHH+PAQISLLSLF NS+PH KV LDILNK H G DI VEK SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        SSNSIVF++D IPPEGLGHTKALHIQVK K YVIARVLVDNGS LN MPKSTLLKLP+DMS+IKSS+MVV+AFDGS RE
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

TrEMBL top hitse value%identityAlignment
A0A5A7T7R4 Ribonuclease H1.5e-7582.68Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        +RNVKEHCK+QDVE+PI AKD+EYKKLVTD+EANEFLKIVKQSEYKIIEQMHH+PA+ISLLSLF NS+PH KV LDILNK H G DI VEK SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
          NSIVF++DEIPPEGLGHTKALHIQVK K YVIARVLVDNGS LN MPKSTLLKLP+DMS+IKSS+MVV+ FDGS RE
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

A0A5A7TRL7 Ribonuclease H1.1e-7582.68Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        +RNVKEHCK+QDVE+PI AKD+EYK LVTD+EANEFLKIVKQSEYKIIEQMHH+PA+ISLLSLF NS+PH KV LDILNK H G DI V+K SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        SSNSIVF++D+IPPEGLGHTKALHIQVK K YVIARVLVDNGS LN MPKSTLLKLP+DMS+IKSS+MVV+AFDGS RE
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

A0A5A7UCD8 Gag-pro-like protein1.5e-7585.56Show/hide
Query:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI
        MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQ                         +PHPKVQLDILNKEHYGDDILVEKLSGIIGNI
Subjt:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI

Query:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
Subjt:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

A0A5D3BJF2 Gag-pro-like protein1.5e-7585.56Show/hide
Query:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI
        MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQ                         +PHPKVQLDILNKEHYGDDILVEKLSGIIGNI
Subjt:  MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNI

Query:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
Subjt:  TSSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.7e-7683.8Show/hide
Query:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT
        + NVKEHCK+QDVE+PI AKD+EYKKLVTD+EANEFLKIVKQSEYKIIEQMHH+PA+ISLLSLF NS+PH KV LDILNK H G DI VEK SGIIGNIT
Subjt:  RRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNIT

Query:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE
        SSNSIVF++DEIPPEGLGHTKALHIQVK K YVIARVLVDNGS LN MPKSTLLKLP+DMS+IKSS+MVV+AFDGS RE
Subjt:  SSNSIVFSNDEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAATGTGAAGGAGCATTGCAAAGAGCAAGATGTAGAGCTGCCTATTAATGCAAAAGATGTAGAGTACAAAAAGCTTGTCACGGATAAGGAAGCAAATGAATT
CTTGAAAATTGTAAAACAAAGTGAGTATAAGATTATAGAGCAAATGCATCATAGTCCAGCTCAAATTTCTTTATTATCTTTGTTTTTTAATTCAGATCCTCATCCCAAAG
TACAATTAGATATTTTGAACAAGGAACATTACGGAGATGACATTTTAGTGGAAAAGTTAAGTGGAATTATTGGAAACATTACATCTTCAAATTCCATAGTCTTCTCAAAT
GATGAAATTCCTCCTGAAGGTTTAGGTCATACAAAAGCACTGCATATTCAAGTGAAGTTCAAAGGCTACGTCATCGCAAGAGTTTTAGTAGATAATGGATCGACTCTTAA
TAAAATGCCTAAATCTACACTATTGAAGCTTCCAATGGACATGTCATACATAAAATCAAGTAGTATGGTTGTGAGAGCTTTTGATGGGTCACATAGAGAAGATGCCCTTG
GATTCACTTCGCAGGAGTGGTGCCATCCACGTTGCATCAAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAAATGTGAAGGAGCATTGCAAAGAGCAAGATGTAGAGCTGCCTATTAATGCAAAAGATGTAGAGTACAAAAAGCTTGTCACGGATAAGGAAGCAAATGAATT
CTTGAAAATTGTAAAACAAAGTGAGTATAAGATTATAGAGCAAATGCATCATAGTCCAGCTCAAATTTCTTTATTATCTTTGTTTTTTAATTCAGATCCTCATCCCAAAG
TACAATTAGATATTTTGAACAAGGAACATTACGGAGATGACATTTTAGTGGAAAAGTTAAGTGGAATTATTGGAAACATTACATCTTCAAATTCCATAGTCTTCTCAAAT
GATGAAATTCCTCCTGAAGGTTTAGGTCATACAAAAGCACTGCATATTCAAGTGAAGTTCAAAGGCTACGTCATCGCAAGAGTTTTAGTAGATAATGGATCGACTCTTAA
TAAAATGCCTAAATCTACACTATTGAAGCTTCCAATGGACATGTCATACATAAAATCAAGTAGTATGGTTGTGAGAGCTTTTGATGGGTCACATAGAGAAGATGCCCTTG
GATTCACTTCGCAGGAGTGGTGCCATCCACGTTGCATCAAAAATTAA
Protein sequenceShow/hide protein sequence
MRRNVKEHCKEQDVELPINAKDVEYKKLVTDKEANEFLKIVKQSEYKIIEQMHHSPAQISLLSLFFNSDPHPKVQLDILNKEHYGDDILVEKLSGIIGNITSSNSIVFSN
DEIPPEGLGHTKALHIQVKFKGYVIARVLVDNGSTLNKMPKSTLLKLPMDMSYIKSSSMVVRAFDGSHREDALGFTSQEWCHPRCIKN