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IVF0016856 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016856
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChorein_N domain-containing protein
Genome locationchr02:9421336..9428886
RNA-Seq ExpressionIVF0016856
SyntenyIVF0016856
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026847 - Vacuolar protein sorting-associated protein 13
IPR026854 - Vacuolar protein sorting-associated protein 13-like, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6649829.1 hypothetical protein CIPAW_06G000200, partial [Carya illinoinensis]1.14e-5486.46Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        M EGLV QLL+GYLGRYVKDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK+GR+GRLSIKIPWKKLGWDPIIIILED+++ ASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

KAG7973515.1 hypothetical protein I3843_06G000200, partial [Carya illinoinensis]1.90e-5486.46Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        M EGLV QLL+GYLGRYVKDIQKE+LKIT WNEE+LLENVELILEAFDYLQLPFALK+GR+GRLSIKIPWKKLGWDPIIIILED+++ ASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

XP_008443663.1 PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X1 [Cucumis melo]1.01e-55100Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

XP_011660209.1 uncharacterized protein LOC101204937 isoform X1 [Cucumis sativus]1.03e-55100Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

XP_031736164.1 uncharacterized protein LOC101204937 isoform X3 [Cucumis sativus]1.02e-55100Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

TrEMBL top hitse value%identityAlignment
A0A1S3B8J3 putative vacuolar protein sorting-associated protein 13A isoform X19.8e-47100Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

A0A6J1D861 uncharacterized protein LOC111018256 isoform X12.0e-4495.83Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWNEE+LLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

A0A6J1D8L0 uncharacterized protein LOC111018256 isoform X22.0e-4495.83Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFEGLV QLLVGYLGRYVKDIQKEKLKITFWNEE+LLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

A0A6J1H814 uncharacterized protein LOC111461381 isoform X11.6e-4496.88Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

A0A6J1JMV4 uncharacterized protein LOC111485823 isoform X11.6e-4496.88Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        MFE LVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALK+GRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD E
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

SwissProt top hitse value%identityAlignment
A1Z713 Vacuolar protein sorting-associated protein 131.8e-1336.17Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD
        +FE +V  +L   LG Y++++ + +LKI  W  +++L+N+++   A D L LP  L  G +G+L +KIPWK L   P+I+ +ED+Y+  S  ++
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDD

Q54KX3 Putative vacuolar protein sorting-associated protein 13F5.4e-1842.39Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQR
        MFE +V  LL  YL  Y+K +  + L I+ W+  + LEN+EL   A +   LPF +KEG +G+LS+KIPW  L  +P+I++++ +YI+AS +
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQR

Q54LB8 Putative vacuolar protein sorting-associated protein 13A3.4e-1241.76Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYL--QLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISA
        +FEGLV  +L   LG YVK++ K++LKI  +   + L+N+EL  +A   L   LP  +K+G +G+L +K+PWK L   P+II ++ IY  A
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYL--QLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISA

Q54LN2 Putative vacuolar protein sorting-associated protein 13D1.1e-1335.64Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ
        +FE +V +++  +LG +++++ K++LKI   N  ++L+N+E+  EAF    LP ++  G VG+L+IK+PW  L  + +++ L+DIYI AS        N 
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ

Query:  S
        S
Subjt:  S

Q555C6 Putative vacuolar protein sorting-associated protein 13B4.4e-1235.96Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISA
        MFE LV  ++  Y+G Y+K++  E+LKI  ++  ++L+N+E+  EA    +LP  +++G +G L++KIPW  L   P+I  ++ I + A
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISA

Arabidopsis top hitse value%identityAlignment
AT4G17140.1 pleckstrin homology (PH) domain-containing protein1.0e-1638Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ
        M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G +G + +K+PW +LG +P+++ L+ I++ A    D E +++
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ

AT4G17140.2 pleckstrin homology (PH) domain-containing protein1.0e-1638Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ
        M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G +G + +K+PW +LG +P+++ L+ I++ A    D E +++
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ

AT4G17140.3 pleckstrin homology (PH) domain-containing protein1.0e-1638Show/hide
Query:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ
        M E  V  LL  YLG YV+ + KE LKI+ W  ++ L+N++L  EA + L+LP  +K G +G + +K+PW +LG +P+++ L+ I++ A    D E +++
Subjt:  MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQ

AT5G24740.1 Protein of unknown function (DUF1162)1.0e-3267.68Show/hide
Query:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        M EG V     LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALK+GRVG+LSIKIPWKKL  DP+ I++ED++I ASQR+D E
Subjt:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE

AT5G24740.2 Protein of unknown function (DUF1162)1.0e-3267.68Show/hide
Query:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE
        M EG V     LL+GYLGRY+KDIQK++LKI+ WN E+LLENVEL  EAF+YLQLP ALK+GRVG+LSIKIPWKKL  DP+ I++ED++I ASQR+D E
Subjt:  MFEGLVG---QLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAAGGACTCGTTGGACAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTAAAGATTACATTCTGGAACGAGGAAATTTTATT
GGAGAATGTTGAGCTCATTCTAGAGGCCTTTGATTATCTTCAATTGCCATTCGCCCTAAAGGAAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTG
GATGGGATCCAATCATTATTATTTTAGAGGATATATATATTTCTGCATCTCAGCGGGATGATGGTGAGGTAATTAACCAAAGTTGCAACCATTGA
mRNA sequenceShow/hide mRNA sequence
TTGCGCTTGAAACCTCTAGAGAAGCCAAAGAGACGGACGAAATAAAATAGCGGCAAAATTGGCGAGAGAGATATAGAAAGAATGATTCGACGGAGCCGGCGAGATTGAGC
CAGAGCTCGAGAGAGATTGAATGAATCGGTGAGAGCATGATTGATTGAGGACGAGATTCAGGGAGAGAAGTAGAGACGGTTCGTGTTCTTCAGTCAAATAATCCCAGACT
AACCTGCTAAAAAACCCAACAATAATCAGATGAACTTAGACGGGGTTACTTGTTGTTGGTAGTGTTTTTAGGGAGAATATCGTGTGAGAATGTTTGAAGGACTCGTTGGA
CAGTTGCTTGTGGGTTATTTGGGCCGATATGTCAAGGATATTCAGAAGGAGAAGCTAAAGATTACATTCTGGAACGAGGAAATTTTATTGGAGAATGTTGAGCTCATTCT
AGAGGCCTTTGATTATCTTCAATTGCCATTCGCCCTAAAGGAAGGTCGTGTAGGGAGGTTAAGCATCAAGATTCCATGGAAAAAGCTTGGATGGGATCCAATCATTATTA
TTTTAGAGGATATATATATTTCTGCATCTCAGCGGGATGATGGTGAGGTAATTAACCAAAGTTGCAACCATTGATCCAAAGGGATGAGGCCCATACTTACTCAATAAACT
TATGCCATATTGTGTTGGCTTCATGGTTATTTAGGGCTCTTGCTCGCACATATATGTAGAATTATCAAAACAACTCTGTTTTAGTGTATTTGTTTGGGTGATTTTGGCAG
GAAAAAATAAGAAATTTCAATAATAATCAGAATCAACTTTGAGTTTTGCTTGTTTTGTTTCAAGTCCGAGCCTAAATTTCGTGTTTTCTTTTTTTTTTTTTTTTCTTAAA
ACAAGTTCATGTTTTGTTAAACTAACTTTTTTTAATTAATATTTTCCTGTATTTTACTAT
Protein sequenceShow/hide protein sequence
MFEGLVGQLLVGYLGRYVKDIQKEKLKITFWNEEILLENVELILEAFDYLQLPFALKEGRVGRLSIKIPWKKLGWDPIIIILEDIYISASQRDDGEVINQSCNH