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IVF0016863 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016863
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L27
Genome locationchr07:4776066..4776473
RNA-Seq ExpressionIVF0016863
SyntenyIVF0016863
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001141 - Ribosomal protein L27e
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR018262 - Ribosomal protein L27e, conserved site
IPR038655 - Ribosomal protein L27e superfamily
IPR041991 - Eukaryotic Ribosomal Protein L27, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608000.1 60S ribosomal protein L27-3, partial [Cucurbita argyrosperma subsp. sororia]1.37e-8497.04Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS KKT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVN DCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

XP_004145994.3 60S ribosomal protein L27-3 [Cucumis sativus]1.29e-8898.52Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

XP_008464678.1 PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo]6.40e-89100Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

XP_011658974.2 60S ribosomal protein L27 [Cucumis sativus]2.93e-8595.56Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKT+KKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QS+VSKV+ASKEIKKRLE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

XP_022940098.1 60S ribosomal protein L27-3-like [Cucurbita moschata]2.51e-8697.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS KKT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

TrEMBL top hitse value%identityAlignment
A0A0A0K3A4 60S ribosomal protein L277.2e-6695.56Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGR+AGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKKKTDKKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QS+VSKV+ASKEIKKRLE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

A0A0A0L310 60S ribosomal protein L272.2e-6797.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAV+VLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKV+RKDSKKKTDKKSRVKAFIKL NYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

A0A1S3CNL3 60S ribosomal protein L272.6e-68100Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

A0A5A7SSA5 60S ribosomal protein L272.6e-68100Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

A0A6J1FNC2 60S ribosomal protein L272.5e-6697.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKFIKPNKAVIVLQGRFAGRKAVIVRNFD+GTRDRPYGHCLVAGMKKYPSKVIRKDS KKT KKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

SwissProt top hitse value%identityAlignment
P41101 60S ribosomal protein L279.7e-5276.26Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDL----KDVVN
        M KF+KPNKAVI+LQG++AGRKAVIVR FDEGTRDRPYGHCLVAG+ +YP KVIRKDS KK  KKSRVKAFIKLVNY HIMPTRYTLD DL    KDVVN
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDL----KDVVN

Query:  VDCLQSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
         D LQ++  KV A +  K RL +RFKTGKNRWFFTKLRF
Subjt:  VDCLQSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

P51419 60S ribosomal protein L27-35.9e-5780Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KVAA KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

Q05462 60S ribosomal protein L271.3e-5680Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+KPNKAVI+LQGR+AG+KAVIV+ FD+GTR++PYGHCLVAG+KK+PSKVI+KDS KKT KKSRVKAF+KLVNYQH+MPTRYTLDVDLKD V  D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KV A KE KK LE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

Q8LCL3 60S ribosomal protein L27-27.2e-5577.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS KKT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        +SK  KV A KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

Q9SKX8 60S ribosomal protein L27-13.7e-5171.85Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS KKT KKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
         SK  KV A KE K + E+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

Arabidopsis top hitse value%identityAlignment
AT2G32220.1 Ribosomal L27e protein family2.6e-5271.85Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVK +KP KAVI+LQGR+ G+KAVIV++FD+GT ++ YGHCLVAG+KKYPSKVIRKDS KKT KKSRVK F K++NYQH+MPTRYTLD+DLK+VV+ D +
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
         SK  KV A KE K + E+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

AT3G22230.1 Ribosomal L27e protein family5.1e-5677.78Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FD+GT DR YGHCLVAG+KKYPSKVIRKDS KKT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        +SK  KV A KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

AT4G15000.1 Ribosomal L27e protein family4.2e-5880Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF
        QSK  KVAA KE K +LE+RFKTGKNRWFFTKLRF
Subjt:  QSKVSKVAASKEIKKRLEDRFKTGKNRWFFTKLRF

AT4G15000.2 Ribosomal L27e protein family2.5e-5078.05Show/hide
Query:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL
        MVKF+K NKAVI+LQGR+AG+KAVI+++FD+G RDRPYGHCLVAG+KKYPSKVIRKDS KKT KKSRVK FIKLVNYQH+MPTRYTLDVDLK+V  +D L
Subjt:  MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCL

Query:  QSKVSKVAASKEIKKRLEDRFKT
        QSK  KVAA KE K +LE+RFKT
Subjt:  QSKVSKVAASKEIKKRLEDRFKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAATTCATCAAGCCGAACAAAGCTGTTATTGTTCTCCAAGGCCGATTTGCCGGCCGGAAAGCTGTAATCGTCCGAAACTTTGATGAAGGAACCCGCGACCGGCC
CTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTCATTCGCAAAGATTCAAAGAAAAAGACAGATAAAAAATCGAGAGTGAAAGCATTCATCAAGC
TTGTGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAAAGTGTCGAAGGTTGCGGCGTCG
AAGGAGATCAAAAAGAGATTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAACTTAGGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAATTCATCAAGCCGAACAAAGCTGTTATTGTTCTCCAAGGCCGATTTGCCGGCCGGAAAGCTGTAATCGTCCGAAACTTTGATGAAGGAACCCGCGACCGGCC
CTACGGCCATTGTTTGGTAGCAGGGATGAAAAAGTACCCGAGCAAGGTCATTCGCAAAGATTCAAAGAAAAAGACAGATAAAAAATCGAGAGTGAAAGCATTCATCAAGC
TTGTGAATTACCAGCACATTATGCCGACGAGGTACACGCTCGACGTTGATCTCAAGGATGTGGTTAATGTGGATTGCTTACAGTCGAAAGTGTCGAAGGTTGCGGCGTCG
AAGGAGATCAAAAAGAGATTGGAGGACAGGTTTAAGACTGGGAAGAACAGGTGGTTTTTCACCAAACTTAGGTTCTGA
Protein sequenceShow/hide protein sequence
MVKFIKPNKAVIVLQGRFAGRKAVIVRNFDEGTRDRPYGHCLVAGMKKYPSKVIRKDSKKKTDKKSRVKAFIKLVNYQHIMPTRYTLDVDLKDVVNVDCLQSKVSKVAAS
KEIKKRLEDRFKTGKNRWFFTKLRF