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IVF0016868 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016868
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:23392421..23392645
RNA-Seq ExpressionIVF0016868
SyntenyIVF0016868
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026215.1 retrotransposon protein [Cucumis melo var. makuwa]1.27e-2292Show/hide
Query:  MDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS
        +D + DQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS
Subjt:  MDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS

KAA0037008.1 subtilisin-like protease SBT3.17 isoform X1 [Cucumis melo var. makuwa]2.45e-1262.07Show/hide
Query:  KRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR
        KR GQ AE V++IRN M+F N+QLK I +    QRQ EDEY  E V QLQDI ELSSR
Subjt:  KRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR

KAA0059863.1 retrotransposon protein [Cucumis melo var. makuwa]7.89e-1056.6Show/hide
Query:  IAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR
        +AETV++I NAM+F ND+LK I +    QRQ ED+Y  + V QLQDI EL+SR
Subjt:  IAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]1.13e-0750Show/hide
Query:  REKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR
        + KR  +  ETV++IR+AM+F NDQLK I      +R  E E   E V QLQ+ILEL SR
Subjt:  REKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR

TYK11924.1 retrotransposon protein [Cucumis melo var. makuwa]8.36e-0853.33Show/hide
Query:  ELREKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELS
        E ++K+ GQ  ETV+IIRN M++ANDQLK I +  N Q Q       E V QLQ ILELS
Subjt:  ELREKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELS

TrEMBL top hitse value%identityAlignment
A0A5A7T2J7 Subtilisin-like protease SBT3.17 isoform X11.3e-0862.07Show/hide
Query:  KRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR
        KR GQ AE V++IRN M+F N+QLK I +    QRQ EDEY  E V QLQDI ELSSR
Subjt:  KRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR

A0A5A7UK94 Uncharacterized protein5.1e-0556.86Show/hide
Query:  REKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQL
        + KR G  AETV+IIRN M+FANDQLK I +  N QRQ ED+   E V  L
Subjt:  REKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQL

A0A5A7UV97 Retrotransposon protein4.6e-0656.6Show/hide
Query:  IAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR
        +AETV++I NAM+F ND+LK I +    QRQ ED+Y  + V QLQDI EL+SR
Subjt:  IAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSR

A0A5D3CL79 Retrotransposon protein6.6e-0553.33Show/hide
Query:  ELREKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELS
        E ++K+ GQ  ETV+IIRN M++ANDQLK I +  N Q Q       E V QLQ ILELS
Subjt:  ELREKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELS

A0A5D3E574 Retrotransposon protein5.8e-1792Show/hide
Query:  MDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS
        +D + DQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS
Subjt:  MDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAAGAGGAACTAAGAGAGAAGCGAGTAGGACAAATAGCTGAAACTGTTGACATCATTCGTAATGCAATGGACTTTGCAAATGACCAGTTGAAGGTCATTCCAAA
ATGTTCGAACACACAACGTCAAGTAGAGGATGAGTACATTACAGAATGCGTGAACCAGTTGCAAGATATCCTTGAACTGAGTAGTCGCATAGAGTATGGATTATACGGAT
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCAAGAGGAACTAAGAGAGAAGCGAGTAGGACAAATAGCTGAAACTGTTGACATCATTCGTAATGCAATGGACTTTGCAAATGACCAGTTGAAGGTCATTCCAAA
ATGTTCGAACACACAACGTCAAGTAGAGGATGAGTACATTACAGAATGCGTGAACCAGTTGCAAGATATCCTTGAACTGAGTAGTCGCATAGAGTATGGATTATACGGAT
CATAA
Protein sequenceShow/hide protein sequence
MLQEELREKRVGQIAETVDIIRNAMDFANDQLKVIPKCSNTQRQVEDEYITECVNQLQDILELSSRIEYGLYGS