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IVF0016909 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016909
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:11377357..11377748
RNA-Seq ExpressionIVF0016909
SyntenyIVF0016909
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035431.1 hypothetical protein E6C27_scaffold285G00510 [Cucumis melo var. makuwa]1.23e-7890Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ             QFNFTGDLAIPISEFKIPRNRALMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG
        ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG

KAA0035766.1 hypothetical protein E6C27_scaffold403G00440 [Cucumis melo var. makuwa]5.52e-4362.79Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDN++EAKIKVRYNY+GFI + IRIKDKD HFF+VHTV IC  KWLA+RDVKIHGSF+RQ             QFNFTGDLAI   +FKI RN  LMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR
        ELTNEEDPTI  +K   G     +K+N +
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR

TYK01568.1 hypothetical protein E5676_scaffold451G001460 [Cucumis melo var. makuwa]7.54e-3256.76Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MN++N+LEAKI VRYNY  FIP+ I+IKDK+GH F+VH V IC  KWLAERDVKI+ SF+RQ             QF F+ +LAI   EF+IP+N++LM 
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIA
        ELT E +PT A
Subjt:  ELTNEEDPTIA

TYK26098.1 hyoscyamine 6-dioxygenase-like [Cucumis melo var. makuwa]1.87e-3762.83Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFM-VHTVIICLVKWLAERDVKIHGSFRRQ--------------QFNFTGDLAIPISEFKIPRNRAL
        M+M N+ EAKIKV+YNY GFIP+AIRIKDKD HFF   HTV IC  KWLA+RDVKIHG F+RQ              QF F GDLAIP  EF+  +NRAL
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFM-VHTVIICLVKWLAERDVKIHGSFRRQ--------------QFNFTGDLAIPISEFKIPRNRAL

Query:  MTELTNEEDPTIA
        M ELT EEDPT+A
Subjt:  MTELTNEEDPTIA

TYK29852.1 hypothetical protein E5676_scaffold208G00930 [Cucumis melo var. makuwa]1.05e-4363.57Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDN++EAKIKVRYNY+GFI + IRIKDKDGHFF+VHTV IC  KWLAERDVKIHGSF+RQ             QFNFT DLAI   +FKI RN  LMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR
        ELTNEEDPTI  +K   G     +K+N +
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR

TrEMBL top hitse value%identityAlignment
A0A5A7T0M9 DUF4283 domain-containing protein3.3e-3562.79Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDN++EAKIKVRYNY+GFI + IRIKDKD HFF+VHTV IC  KWLA+RDVKIHGSF+RQ             QFNFTGDLAI   +FKI RN  LMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR
        ELTNEEDPTI  +K   G     +K+N +
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR

A0A5D3BRD1 Uncharacterized protein2.4e-2556.76Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MN++N+LEAKI VRYNY  FIP+ I+IKDK+GH F+VH V IC  KWLAERDVKI+ SF+RQ             QF F+ +LAI   EF+IP+N++LM 
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIA
        ELT E +PT A
Subjt:  ELTNEEDPTIA

A0A5D3DR13 Uncharacterized protein4.3e-5990Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ             QFNFTGDLAIPISEFKIPRNRALMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG
        ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPRG

A0A5D3DRB3 Hyoscyamine 6-dioxygenase-like1.0e-2862.83Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFF-MVHTVIICLVKWLAERDVKIHGSFRRQ--------------QFNFTGDLAIPISEFKIPRNRAL
        M+M N+ EAKIKV+YNY GFIP+AIRIKDKD HFF   HTV IC  KWLA+RDVKIHG F+RQ              QF F GDLAIP  EF+  +NRAL
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFF-MVHTVIICLVKWLAERDVKIHGSFRRQ--------------QFNFTGDLAIPISEFKIPRNRAL

Query:  MTELTNEEDPTIA
        M ELT EEDPT+A
Subjt:  MTELTNEEDPTIA

A0A5D3E1T4 DUF4283 domain-containing protein8.8e-3663.57Show/hide
Query:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT
        MNMDN++EAKIKVRYNY+GFI + IRIKDKDGHFF+VHTV IC  KWLAERDVKIHGSF+RQ             QFNFT DLAI   +FKI RN  LMT
Subjt:  MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQ-------------QFNFTGDLAIPISEFKIPRNRALMT

Query:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR
        ELTNEEDPTI  +K   G     +K+N +
Subjt:  ELTNEEDPTIAPRKFMTGIFYNQAKRNPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGGACAACATCCTTGAGGCAAAGATTAAGGTTAGATACAACTATAATGGATTCATTCCATCTGCCATTAGAATCAAAGACAAAGATGGTCATTTCTTTATGGT
GCACACGGTCATAATCTGCTTAGTCAAATGGTTAGCAGAGCGTGATGTGAAAATCCATGGATCTTTTAGGAGACAACAATTCAACTTCACCGGAGACTTGGCAATTCCGA
TCAGTGAATTCAAAATTCCAAGAAACAGAGCATTAATGACAGAGTTGACAAATGAAGAAGATCCCACAATAGCGCCAAGGAAATTTATGACAGGGATCTTCTATAATCAG
GCAAAAAGAAATCCAAGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGGACAACATCCTTGAGGCAAAGATTAAGGTTAGATACAACTATAATGGATTCATTCCATCTGCCATTAGAATCAAAGACAAAGATGGTCATTTCTTTATGGT
GCACACGGTCATAATCTGCTTAGTCAAATGGTTAGCAGAGCGTGATGTGAAAATCCATGGATCTTTTAGGAGACAACAATTCAACTTCACCGGAGACTTGGCAATTCCGA
TCAGTGAATTCAAAATTCCAAGAAACAGAGCATTAATGACAGAGTTGACAAATGAAGAAGATCCCACAATAGCGCCAAGGAAATTTATGACAGGGATCTTCTATAATCAG
GCAAAAAGAAATCCAAGAGGCTGA
Protein sequenceShow/hide protein sequence
MNMDNILEAKIKVRYNYNGFIPSAIRIKDKDGHFFMVHTVIICLVKWLAERDVKIHGSFRRQQFNFTGDLAIPISEFKIPRNRALMTELTNEEDPTIAPRKFMTGIFYNQ
AKRNPRG