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IVF0016913 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016913
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr06:9510919..9511416
RNA-Seq ExpressionIVF0016913
SyntenyIVF0016913
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035182.1 uncharacterized protein E6C27_scaffold57G002840 [Cucumis melo var. makuwa]3.19e-5065.69Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        +A+YN RVLEIAN SFNL ++I ESK+VRK+L SL  K DM  T IEEAHDIT LKLDELFGSLLTFEM I NRE+ KG G+A K++++EE  DN     
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE IALLTKQ+SKVVKKF+NM+T GSN R+  NF
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

KAA0052069.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.36e-4762.77Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        ++ YN RVLEIANES  L ++IP+SK+V K+L+SL  KFDM  T IEEAHDIT LKLDELFGSLLTFE+ I ++ED KGKGIAFK I++EE   N     
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE IALLTKQ+SKVVKKF+N++T GSN ++  N+
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

KAA0052278.1 Receptor-like protein 12 [Cucumis melo var. makuwa]7.50e-4962.32Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        + +YN +VLEI NESFNL ++IP+SK+VRKVLRSL  KF+M  T I+EAHDIT LKLD  F SLLTFEM I NRE+ KGKG+AFK++++EE  DN  S  
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFE
         N NE IALL K +SKVVKKFRN++  GSN R+  NF+
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFE

KAA0054430.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.68e-4762.77Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        +A YN RV+EIANESFNL   I E K+VRKVLRSL  KFDM    I+E HDIT LKLDELF SLL FEM I NRED KGKGIAFK+I++EE  DN  +  
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE   L+TK++SKVVK+FRNM++ GSN R+   F
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

TYJ98757.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]9.17e-4864.18Show/hide
Query:  YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENA
        YN RVLEIANESFNL +RI ES +V KVL SL  KFDM  T IEEAHDI  LKL+ELFGSL TFEMA   ++D KGKG+AFK +++EE  ++N +   N 
Subjt:  YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENA

Query:  NELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
        NE IALLTKQ+SKVVKKF NM+T G+  R+QN+F
Subjt:  NELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

TrEMBL top hitse value%identityAlignment
A0A5A7SVB2 Uncharacterized protein1.1e-3965.69Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        +A+YN RVLEIAN SFNL ++I ESK+VRK+L SL  K DM  T IEEAHDIT LKLDELFGSLLTFEM I NRE+ KG G+A K++++EE  DN     
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE IALLTKQ+SKVVKKF+NM+T GSN R+  NF
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

A0A5A7UA03 Gag-proteinase polyprotein4.5e-3862.77Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        ++ YN RVLEIANES  L ++IP+SK+VRKVLRSL  KFDM  T IEEAHDIT LKLDELF SLLTFEMAI +RE+ KGKG+AFK+I++EE   N     
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE IALL +Q+SKVV+KF+N++T GSN ++ N++
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

A0A5A7UAM6 Receptor-like protein 121.6e-3862.32Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        + +YN +VLEI NESFNL ++IP+SK+VRKVLRSL  KF+M  T I+EAHDIT LKLD  F SLLTFEM I NRE+ KGKG+AFK++++EE  DN  S  
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFE
         N NE IALL K +SKVVKKFRN++  GSN R+  NF+
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNFE

A0A5D3BI07 Gag-proteinase polyprotein2.3e-3764.18Show/hide
Query:  YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENA
        YN RVLEIANESFNL +RI ES +V KVL SL  KFDM  T IEEAHDI  LKL+ELFGSL TFEMA   ++D KGKG+AFK +++EE  ++N +   N 
Subjt:  YNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENA

Query:  NELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
        NE IALLTKQ+SKVVKKF NM+T G+  R+QN+F
Subjt:  NELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

A0A5D3BN48 Gag-pol polyprotein1.3e-3762.77Show/hide
Query:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN
        ++ YN RVLEIANES  L ++IP+SK+V K+L+SL  KFDM  T IEEAHDIT LKLDELFGSLLTFE+ I ++ED KGKGIAFK I++EE   N     
Subjt:  MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPN

Query:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF
         N NE IALLTKQ+SKVVKKF+N++T GSN ++  N+
Subjt:  ENANELIALLTKQYSKVVKKFRNMDTDGSNYRDQNNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22260.1 Myosin heavy chain-related protein7.2e-0426.67Show/hide
Query:  KYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNEN
        KY+V   EI N          E   V K+++ LSNKFD   +  +E     LL + E   SL+     +  RE+ + K +  KA + +E+  +       
Subjt:  KYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNEN

Query:  ANELIALLTKQYSKVVKKFR
          E I  L  ++   +K F+
Subjt:  ANELIALLTKQYSKVVKKFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAA
CAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATA
GAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTG
ACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGG
AAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATATAATGTGAGAGTTCTGGAGATTGCAAATGAATCATTCAATCTTGCTGACAGGATACCTGAATCTAAACTAGTAAGAAAAGTGTTGCGTTCTTTGTCCAA
CAAATTTGATATGATGTTTACTACAATTGAAGAAGCACATGATATTACTCTGCTAAAACTAGATGAATTATTTGGATCTTTGCTTACTTTTGAAATGGCCATACCAAATA
GAGAAGACACGAAGGGAAAAGGCATTGCATTCAAAGCTATTCATAAGGAAGAAGTTCTTGATAATAATAAATCCCCTAATGAGAATGCAAATGAGTTAATTGCGTTATTG
ACTAAACAATACTCTAAAGTAGTGAAGAAATTCAGAAATATGGATACAGATGGTTCAAATTATAGAGATCAAAACAATTTTGAAGAAGGGATTCTTAAAACTAAAATAGG
AAAGAAGGTAGGACCTTCAAATATAGACAATGTCGTGAATTTGTCCACTATCAAGTAG
Protein sequenceShow/hide protein sequence
MAKYNVRVLEIANESFNLADRIPESKLVRKVLRSLSNKFDMMFTTIEEAHDITLLKLDELFGSLLTFEMAIPNREDTKGKGIAFKAIHKEEVLDNNKSPNENANELIALL
TKQYSKVVKKFRNMDTDGSNYRDQNNFEEGILKTKIGKKVGPSNIDNVVNLSTIK