; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016927 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016927
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr06:6306276..6309626
RNA-Seq ExpressionIVF0016927
SyntenyIVF0016927
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060718.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa]1.58e-23590.4Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQ------------------------------------VDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRIIFLGSQ                                    VDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIIFLGSQ------------------------------------VDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
        DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
Subjt:  DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
Subjt:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]2.83e-243100Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
Subjt:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]1.30e-22393.24Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NHPS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQ-GGEGSDEERGSQQETEEPSPV
        KAKKNLPSESKILKNGY+ GG+GSD+ERG QQETEEPSPV
Subjt:  KAKKNLPSESKILKNGYQ-GGEGSDEERGSQQETEEPSPV

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]1.95e-19985.84Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        ME+SFT+ PSPSP  L RFDHG+  SS  P+ TP  HSHG N + N  R    S P++   SLSSSS+RRTLSSNWDVL N+SA+SAPSL RFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        KAKKNLPSE KIL+NGYQGG+G+DEERG+QQETEEPSPV
Subjt:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]6.01e-21090.56Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFT+APS SP+ L R DHGL  SS+ PIS PS HSHG N TSN FRIRN SVPV+N PS +SSSLRRTLSS+WDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAK+YGLIDEVIDDGKPGLIAP AEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        K KKNLPSE+KIL+NGYQ G+GSDEERGSQQETEE SPV
Subjt:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit3.3e-17693.24Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKR DHG   SSH PISTPS HSHG NFTSN FRIRNCSVPV+NHPS SSSSLRRTLSSNWDV SNYS SSA SLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP+EQIELDT+RDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTR+WDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGY-QGGEGSDEERGSQQETEEPSPV
        KAKKNLPSESKILKNGY +GG+GSD+ERG QQETEEPSPV
Subjt:  KAKKNLPSESKILKNGY-QGGEGSDEERGSQQETEEPSPV

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit3.6e-191100Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
Subjt:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

A0A5A7UZN2 ATP-dependent Clp protease proteolytic subunit1.0e-18590.4Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGS------------------------------------QVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRIIFLGS                                    QVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIIFLGS------------------------------------QVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
        DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI
Subjt:  DVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
Subjt:  DEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit9.0e-15885.84Show/hide
Query:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN
        ME+SFT+ PSPSP  L RFDHG+  SS  P+ TP  HSHG N + N  R    S P++   SLSSSS+RRTLSSNWDVL N+SA+SAPSL RFEELDTTN
Subjt:  MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIIFLGSQVDD+TADFIISQLLFLDAED TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA+A  PPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV
        KAKKNLPSE KIL+NGYQGG+G+DEERG+QQETEEPSPV
Subjt:  KAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSPV

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit1.8e-15385Show/hide
Query:  MELSFTHAPSPSPYG-LKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLN-HPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDT
        MELSFT+APSPS +  L  F+HG+  +S  P+STP  HSHG N +SN FRIR  SVPV     SLSSS LRRTLSSNWDVL NYSA+SAP+LPRFEELDT
Subjt:  MELSFTHAPSPSPYG-LKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLN-HPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDT

Query:  TNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRV
        TNMLLRQRIIFLGSQVDD+TADFIISQLLFLDAEDPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVST+C+GLAASMGAFLLA+GSKGKRFCMPNGRV
Subjt:  TNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRV

Query:  MIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEG
        MIHQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEA PPPKTRVWDLWK+EG
Subjt:  MIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEG

Query:  SRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSP
        SRKAKKNLPSE+KIL+NGYQ   GSDEER  Q ETEEPSP
Subjt:  SRKAKKNLPSESKILKNGYQGGEGSDEERGSQQETEEPSP

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 22.3e-5762.79Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IYD M+    DV+TIC GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 13.9e-5763.58Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RIIFLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+D MK  + DV TIC GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+E+I  DT+RD FM+P EA++YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 32.3e-5762.79Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG+ VDD  AD I++QLLFL+AEDP KDI+L+INSPGGSVTAGM IYD M+    DV+TIC GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PLE+IE+DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 12.3e-5763.58Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG QVD   A+ I++QLLFLDAEDP KDI L+INSPGGSVTAGMGI+D MK  + DV TIC GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+E+I  DT+RD FM+P EAK+YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic2.4e-11574.83Show/hide
Query:  NHSHGRNFTSNNFRIRNCSVPVLNHPSLS-SSSLRRTLSSNWDVLS---NYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDA
        N     NF   N RI   S P     S+S S   R+TLSSNWDV S   +  A S   LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQLL LDA
Subjt:  NHSHGRNFTSNNFRIRNCSVPVLNHPSLS-SSSLRRTLSSNWDVLS---NYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDA

Query:  EDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKI
        ED  +DI LFINSPGGS+TAGMGIYDAMK CKADVST+CLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRIREM YHKIKLNKI
Subjt:  EDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKI

Query:  FSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY
        FSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKVEG++K   NLPSE  + +NGY
Subjt:  FSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.9e-5250.73Show/hide
Query:  WDVLSNYSASSAPSLPRFEE------------LDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCK
        W +  +    S+P  P + +                + L + RII  G  VDD  A+ I++QLL+LDA DPTKDI +++NSPGGSVTAGM I+D M+  +
Subjt:  WDVLSNYSASSAPSLPRFEE------------LDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCK

Query:  ADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGL
         DVST+C+GLAASMGAFLL++G+KGKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ LE+I  DTDRD FM+  EAKEYGL
Subjt:  ADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGL

Query:  IDEVI
        ID VI
Subjt:  IDEVI

AT1G11750.1 CLP protease proteolytic subunit 68.6e-3641.95Show/hide
Query:  LDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPN
        LD +++L R RIIF+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + IYD M   K  V T+  G+AAS GA LLA G KG R+ MPN
Subjt:  LDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPN

Query:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID
         RVMIHQP    GG   ++  ++ E    + K++++++  TG+PLE+++  T+RD F++  EA E+GLID +++
Subjt:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 31.7e-11674.83Show/hide
Query:  NHSHGRNFTSNNFRIRNCSVPVLNHPSLS-SSSLRRTLSSNWDVLS---NYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDA
        N     NF   N RI   S P     S+S S   R+TLSSNWDV S   +  A S   LP FEELDTTNMLLRQRI+FLGSQVDD+TAD +ISQLL LDA
Subjt:  NHSHGRNFTSNNFRIRNCSVPVLNHPSLS-SSSLRRTLSSNWDVLS---NYSASSAPSLPRFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDA

Query:  EDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKI
        ED  +DI LFINSPGGS+TAGMGIYDAMK CKADVST+CLGLAASMGAFLLASGSKGKR+CMPN +VMIHQPLGTAGGKATEMSIRIREM YHKIKLNKI
Subjt:  EDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKI

Query:  FSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY
        FSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGLIAPI + TPPPKT+VWDLWKVEG++K   NLPSE  + +NGY
Subjt:  FSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGY

AT5G23140.1 nuclear-encoded CLP protease P71.6e-4245.98Show/hide
Query:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LL++RII +   ++D T+  +++QLL+L++E+P+K I +++NSPGG VTAG+ IYD M+  ++ +STICLG AASM + LLA+G+KG+R  +PN 
Subjt:  DTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD
         VMIHQP G   G+A +++I  +++      LN+++ + TG+PL+ +  + DRD+FM P EAK +G+IDEVID+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P44.6e-5353.09Show/hide
Query:  RFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRF
        R  E D   +LLR+RI+FLGS +DD  AD I+SQLL LDA+DP KDIKLFINSPGGS++A M IYD ++L +ADVSTI LG+AAS  + +L +G+KGKRF
Subjt:  RFEELDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRF

Query:  CMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP
         MPN R+MIHQPLG A G+A ++ I+ +E+ ++K  +  I +  T +  EQ+  D DRD +M+P EA EYGLID VID      + P+ +   P
Subjt:  CMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAGTTTCACACACGCACCTTCTCCTTCGCCTTATGGGCTTAAGCGTTTCGACCATGGACTTCATCACTCTTCTCATGTTCCAATTTCTACTCCTTCCAACCA
CTCCCATGGCCGCAATTTCACTTCTAATAATTTTAGAATCAGAAATTGTTCGGTTCCGGTGCTAAACCACCCCTCGCTTAGTTCCTCTTCTCTTAGACGCACCTTATCCA
GTAATTGGGATGTTCTTAGCAACTATTCTGCATCTTCCGCTCCATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTG
GGTTCTCAGGTTGATGATGTGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACCAAAGATATTAAATTGTTTATCAACTCACCTGGTGG
CTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTTTCAACCATTTGTCTGGGACTCGCTGCATCCATGGGAGCATTTCTTCTAGCCT
CTGGTTCAAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCACTTGGAACAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATACGAGAA
ATGGCGTATCACAAGATTAAGCTAAACAAGATTTTTTCTAGAATCACTGGAAAGCCATTAGAGCAGATTGAATTGGATACAGATCGTGATAATTTTATGAATCCTTGGGA
AGCTAAGGAGTATGGTTTGATCGATGAAGTTATCGATGACGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACTCGAGTCTGGGATCTAT
GGAAGGTTGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATCAAGGGGGTGAAGGAAGTGACGAAGAGCGTGGTAGCCAG
CAGGAAACAGAAGAACCAAGTCCTGTATGA
mRNA sequenceShow/hide mRNA sequence
GTAAATATGGGGGAAAATACTCCGAAAATACTCTTATATTGGTAGAGCAGCCCAATCTTTGGATTTCTTGTGGGTGCTTCCCCTTCTGCTCTCAATAGCGAAAATGGAGT
TGAGTTTCACACACGCACCTTCTCCTTCGCCTTATGGGCTTAAGCGTTTCGACCATGGACTTCATCACTCTTCTCATGTTCCAATTTCTACTCCTTCCAACCACTCCCAT
GGCCGCAATTTCACTTCTAATAATTTTAGAATCAGAAATTGTTCGGTTCCGGTGCTAAACCACCCCTCGCTTAGTTCCTCTTCTCTTAGACGCACCTTATCCAGTAATTG
GGATGTTCTTAGCAACTATTCTGCATCTTCCGCTCCATCCTTGCCTCGATTCGAAGAGCTTGACACTACCAATATGCTTCTCCGCCAGCGAATCATCTTCTTGGGTTCTC
AGGTTGATGATGTGACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGAAGACCCAACCAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTC
ACTGCTGGAATGGGAATATATGATGCAATGAAGTTATGCAAGGCTGATGTTTCAACCATTTGTCTGGGACTCGCTGCATCCATGGGAGCATTTCTTCTAGCCTCTGGTTC
AAAGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCACTTGGAACAGCTGGAGGAAAAGCAACAGAGATGAGCATACGGATACGAGAAATGGCGT
ATCACAAGATTAAGCTAAACAAGATTTTTTCTAGAATCACTGGAAAGCCATTAGAGCAGATTGAATTGGATACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAG
GAGTATGGTTTGATCGATGAAGTTATCGATGACGGGAAGCCTGGACTTATTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACTCGAGTCTGGGATCTATGGAAGGT
TGAAGGGAGTCGAAAAGCCAAGAAGAATTTGCCTTCAGAAAGCAAGATTTTGAAGAATGGATATCAAGGGGGTGAAGGAAGTGACGAAGAGCGTGGTAGCCAGCAGGAAA
CAGAAGAACCAAGTCCTGTATGACGCAGGACTCACCCTGTTCCTCTTCTTCCTCCATTCCTCTGCCTCTATTGTTGTATCCTAGCTTGTTCTTTCCATTCTAAAATAGTT
GTTTCTCTGTAAGATCTTAAGGCGATTATTACCAATTTGTTAAACACGCCTAGGTTATGGAAAATTCAAGGGTCATAACATTCCCTTTCTCTCCCCTTTTCTAGATGCTA
AAATATTGCTCGAGTCTGATATTGAATTTGTCTCGAAACCTTGGCTCAATGTTCGATGGACCACCGATGACTGTTTCTGAGTTGCTGCAACTTGAATGGAAGTTTGTACG
GGTAGTGTTCTCCATTTGGATTAAGATTTAAGGCAGGTGATAATGTTTGAATTCAA
Protein sequenceShow/hide protein sequence
MELSFTHAPSPSPYGLKRFDHGLHHSSHVPISTPSNHSHGRNFTSNNFRIRNCSVPVLNHPSLSSSSLRRTLSSNWDVLSNYSASSAPSLPRFEELDTTNMLLRQRIIFL
GSQVDDVTADFIISQLLFLDAEDPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTICLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE
MAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSESKILKNGYQGGEGSDEERGSQ
QETEEPSPV