; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016939 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016939
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-binding protein
Genome locationchr08:1157190..1162033
RNA-Seq ExpressionIVF0016939
SyntenyIVF0016939
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]6.79e-74100Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022925642.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata]3.77e-7196.09Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022926831.1 DNA-binding protein DDB_G0278111-like [Cucurbita moschata]5.35e-7196.09Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_031744105.1 DNA-binding protein DDB_G0278111 isoform X1 [Cucumis sativus]4.34e-73100Show/hide
Query:  NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL
        NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL
Subjt:  NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL

Query:  LEQINNQTTKQTKVTIQRRRSVLEDDD
        LEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LEQINNQTTKQTKVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]1.13e-7298.44Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KKK2 Uncharacterized protein1.6e-54100Show/hide
Query:  NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL
        NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL
Subjt:  NDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITL

Query:  LEQINNQTTKQTKVTIQRRRSVLEDDD
        LEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LEQINNQTTKQTKVTIQRRRSVLEDDD

A0A1S3AZB0 DNA-binding protein DDB_G02781115.4e-55100Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EC84 DNA-binding protein DDB_G0278111-like isoform X26.6e-5396.09Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X26.6e-5396.09Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRG+GSQNNPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like8.6e-5396.09Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQ+NPEQQKAQEEA+SEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O13929 Uncharacterized protein C23C4.09c3.1e-1544.09Show/hide
Query:  DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL
        D EL+AIRQ R+ +L A+ G    N      + ++ +   +E RQ +LSQIL   AR+RL RIALV+ ++A  VE+++LR A+ GQI  K+SE  LI LL
Subjt:  DPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL

Query:  EQINNQTTK--QTKVTIQRRRSVLEDD
        E+I+ + +K  +TK+ I RR    EDD
Subjt:  EQINNQTTK--QTKVTIQRRRSVLEDD

O14737 Programmed cell death protein 51.1e-1542.97Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 51.1e-1542.97Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781117.9e-1953.51Show/hide
Query:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   +PE Q+ QE  R EA ERRQ +L QIL+  ARERLSRI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 51.1e-1542.97Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ+EA+    E R  +L+Q+L   AR RLS +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein4.5e-4682.44Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MNDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        LITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein5.9e-4681.82Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
        M DPELEAIRQRRMQELMA++GM    G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
Subjt:  MNDPELEAIRQRRMQELMAQRGM----GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEE

Query:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        RLITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein1.2e-4380.16Show/hide
Query:  MNDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q NPEQ+K QE+A+ EA+ERRQMMLSQ+LS QARER++RIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MNDPELEAIRQRRMQELMAQRGM---GSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSV
        LITLLEQIN+QTTKQTKVT+    +V
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATCCAGAGCTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGA
AGCTAGGAGTGAAGCAGAGGAACGTAGGCAAATGATGCTGAGTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCAC
GAGGTGTTGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACAAATCAACAATCAGACCACA
AAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTTCTAGAGGATGACGATTAG
mRNA sequenceShow/hide mRNA sequence
GTTAGTTCTCTATTTTCCTTATTATTTATGTTAAGAAAAACAAAGAACCAAAGAACTCTCTTCCACTACGATTTAATTCGGATCCCAAAGTTAGTGGAAACAAGAGTTAG
AAAGGCGCCACAACCTGACCCTGAGAGAGTTACGATACGAGCGACAGGGGAAAAAGGTGGGTCGCGTCCTATCAACGCAACCGAGCAGTTCTCCCCCCTCTCTTCGTTTT
TTCCTCCCCAGCTTATAGAGAAATCATTCAACTCTACTTCTACTAACTGCTACCTCCATCCTCGAAACAATGAATGATCCAGAGCTAGAAGCAATCAGGCAGAGAAGAAT
GCAGGAACTCATGGCCCAGCGTGGCATGGGGAGCCAAAATAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGTAGGCAAATGATGCTGA
GTCAGATTCTGTCAATGCAAGCCAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCACGAGGTGTTGAAGATGTTATACTGAGAGCTGCACAGATGGGC
CAAATTGTAGAGAAGGTCTCTGAAGAGAGGCTTATTACATTGCTAGAACAAATCAACAATCAGACCACAAAACAGACGAAAGTCACTATACAAAGGCGTCGAAGCGTTCT
AGAGGATGACGATTAGCAAGTGAGATGTGAGATGAATTGCATACCTATGTGATATAATGCATATACCAGCAGTCTTGGTTTTATGTTTATTGCTCGCGTGAGACAGTATC
AACCTTTTTATCTATTACTCTGCTGTGTTATTTTATGGGAATATTCTCATGTCAGAATGCGAGAGCTCCTCGGAGTTAGCTGTTATTACTCCATTGTTGCGGTTATATTC
GCCAAACTATCAAGTATCAACCTTGAAATATTATTTTGCTTTCTAATTTGTGATTGTTAAAGTGGAATTGATTTTCCTTCAATTCTGACTGTTTTAATTTAGAGATTGAT
TTGTCGCTGTTTGATGCAATCCACACAAATTTGAAACCTTTGAATGCAGCTCTAGATAAATGGTTTCAATCCACACACATTTGAAACCTCTGAATGCAGCTCTAGATAAA
GGGTCTCCTTGGTTGCTG
Protein sequenceShow/hide protein sequence
MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
KQTKVTIQRRRSVLEDDD