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IVF0016940 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016940
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:10900207..10900431
RNA-Seq ExpressionIVF0016940
SyntenyIVF0016940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047659.1 uncharacterized protein E6C27_scaffold115G001520 [Cucumis melo var. makuwa]5.27e-0864Show/hide
Query:  YQETFQNFMESMETIQIKSDKKYSIERLKILGAT-VFEGSLDPADAKACL
        YQET Q FM+S+  +Q++SDKK+S ERLK L AT VFEGS+DPADA+  L
Subjt:  YQETFQNFMESMETIQIKSDKKYSIERLKILGAT-VFEGSLDPADAKACL

KAA0062654.1 uncharacterized protein E6C27_scaffold79G001720 [Cucumis melo var. makuwa]1.55e-0750.94Show/hide
Query:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL
        +E+ YQ+  Q  +ES+ ++Q +S KK++IERLK LGA VFEGS DP D +  L
Subjt:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL

KAA0063184.1 uncharacterized protein E6C27_scaffold381G00720 [Cucumis melo var. makuwa]1.82e-0556.82Show/hide
Query:  QNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL
        Q  +ES+  +Q+K  K ++IERLK LG TVFEGS DPA+A+A L
Subjt:  QNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL

TYK01187.1 uncharacterized protein E5676_scaffold2044G00320 [Cucumis melo var. makuwa]1.55e-0750.94Show/hide
Query:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL
        +E+ YQ+  Q  +ES+ ++Q +S KK++IERLK LGA VFEGS DP D +  L
Subjt:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL

WP_217833179.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.06e-0547.06Show/hide
Query:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKA
        +EQ +    Q    S+ +++   +KKYSIERLK LGAT FEG++DP +A+A
Subjt:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKA

TrEMBL top hitse value%identityAlignment
A0A5A7U2K3 Retrotrans_gag domain-containing protein1.7e-0564Show/hide
Query:  YQETFQNFMESMETIQIKSDKKYSIERLKILGAT-VFEGSLDPADAKACL
        YQET Q FM+S+  +Q++SDKK+S ERLK L AT VFEGS+DPADA+  L
Subjt:  YQETFQNFMESMETIQIKSDKKYSIERLKILGAT-VFEGSLDPADAKACL

A0A5A7V5X4 Uncharacterized protein2.3e-0550.94Show/hide
Query:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL
        +E+ YQ+  Q  +ES+ ++Q +S KK++IERLK LGA VFEGS DP D +  L
Subjt:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL

A0A5D3BPE1 Uncharacterized protein2.3e-0550.94Show/hide
Query:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL
        +E+ YQ+  Q  +ES+ ++Q +S KK++IERLK LGA VFEGS DP D +  L
Subjt:  DEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGACCATACTTTAGGAACTGGAATCAAGTACGAGGCAACAACATCTAAGAATGATGAACAAAGTTATCAAGAAACGTTCCAAAATTTTATGGAATCTATGGA
AACAATCCAAATCAAGTCTGATAAAAAGTATAGCATTGAAAGATTAAAAATTTTAGGTGCTACGGTATTTGAAGGATCTCTAGATCCAGCTGATGCAAAAGCATGCTTGA
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGACCATACTTTAGGAACTGGAATCAAGTACGAGGCAACAACATCTAAGAATGATGAACAAAGTTATCAAGAAACGTTCCAAAATTTTATGGAATCTATGGA
AACAATCCAAATCAAGTCTGATAAAAAGTATAGCATTGAAAGATTAAAAATTTTAGGTGCTACGGTATTTGAAGGATCTCTAGATCCAGCTGATGCAAAAGCATGCTTGA
TTTAA
Protein sequenceShow/hide protein sequence
MEEDHTLGTGIKYEATTSKNDEQSYQETFQNFMESMETIQIKSDKKYSIERLKILGATVFEGSLDPADAKACLI