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IVF0016975 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016975
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:9157040..9157207
RNA-Seq ExpressionIVF0016975
SyntenyIVF0016975
Gene Ontology termsGO:0016788 - hydrolase activity, acting on ester bonds (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038315.1 retrotransposon protein [Cucumis melo var. makuwa]1.48e-2681.82Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC+DVD+VDEG+STYATTIA+EDI YI+TTNEWSQW D+++ESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]1.47e-2885.45Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYCDD+D+VDEGDS YATT A+EDIHYI+TTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
KAA0062745.1 retrotransposon protein [Cucumis melo var. makuwa]5.81e-33100Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
TYJ95515.1 retrotransposon protein [Cucumis melo var. makuwa]7.09e-2785.45Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC+DV++VDEGDSTYATT A+EDIHYI+TTNEWSQWHDEL++SMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
TYK14046.1 retrotransposon protein [Cucumis melo var. makuwa]2.17e-2689.09Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC DVD+VDEGDSTYATTIA+EDIHYI+TTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7TW41 Retrotransposon protein1.4e-2089.09Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC DVD+VDEGDSTYATTIA+EDIHYI+TTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
A0A5A7VDR4 Retrotransposon protein1.1e-2085.45Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC+DV++VDEGDSTYATT A+EDIHYI+TTNEWSQWHDEL++SMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
A0A5D3BAK8 Retrotransposon protein1.1e-2085.45Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC+DV++VDEGDSTYATT A+EDIHYI+TTNEWSQWHDEL++SMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
A0A5D3CUG9 Retrotransposon protein1.4e-2089.09Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYC DVD+VDEGDSTYATTIA+EDIHYI+TTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
A0A5D3DG14 Retrotransposon protein2.1e-24100Show/hide
Query:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
        MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
Subjt:  MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGATGACGTTGATAACGTGGACGAGGGGGACTCCACGTACGCAACGACCATCGCTACAGAAGACATACACTACATTAAGACGACAAACGAGTGGTCTCA
GTGGCACGACGAACTAATTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGATGACGTTGATAACGTGGACGAGGGGGACTCCACGTACGCAACGACCATCGCTACAGAAGACATACACTACATTAAGACGACAAACGAGTGGTCTCA
GTGGCACGACGAACTAATTGAATCGATGTTCACAGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDNVDEGDSTYATTIATEDIHYIKTTNEWSQWHDELIESMFTDWQLRNA