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IVF0017022 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017022
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr03:6191918..6192127
RNA-Seq ExpressionIVF0017022
SyntenyIVF0017022
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050651.1 uncharacterized protein E6C27_scaffold673G001250 [Cucumis melo var. makuwa]7.77e-1486.05Show/hide
Query:  KATSLQEKAQQKHDRGFDFREQGGRREGSCERFTVMANKEDEE
        KA S++EKAQQKHDR FDF EQGGRREGSCERF VMANKEDEE
Subjt:  KATSLQEKAQQKHDRGFDFREQGGRREGSCERFTVMANKEDEE
TrEMBL top hitse value%identityAlignment
A0A5D3C784 Integrase catalytic domain-containing protein1.7e-1072.73Show/hide
Query:  KATSLQEKAQQKHDRGFDFREQGGRREGSCERFTVMANKEDEEDLIFVNKEDKQK
        KA S++EKAQQKHDR FDF EQGGRREGSCERF VMANKEDEE      KED+ +
Subjt:  KATSLQEKAQQKHDRGFDFREQGGRREGSCERFTVMANKEDEEDLIFVNKEDKQK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCAAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTACGGTGATGGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGACGAAATCTTGGAAGGCGACTTCATTGCAAGAGAAGGCTCAGCAGAAACACGACAGAGGATTTGATTTTCGCGAACAAGGAGGACGAAGAGAAGGTTCGTG
CGAGAGATTTACGGTGATGGCGAACAAGGAAGACGAAGAGGATTTGATTTTTGTGAACAAGGAGGACAAACAGAAGGTTCGTGCGAGAGATTTAGGGTGA
Protein sequenceShow/hide protein sequence
MGKTKSWKATSLQEKAQQKHDRGFDFREQGGRREGSCERFTVMANKEDEEDLIFVNKEDKQKVRARDLG