; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017055 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017055
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationchr06:24456210..24457498
RNA-Seq ExpressionIVF0017055
SyntenyIVF0017055
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147963.1 histone deacetylase complex subunit SAP18 [Cucumis sativus]3.87e-11498.8Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA APTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_008448944.1 PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis melo]6.69e-115100Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022152730.1 histone deacetylase complex subunit SAP18-like [Momordica charantia]8.42e-10995.78Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_022946300.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]3.16e-10492.77Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ KAPPP PR RFEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

XP_038905116.1 histone deacetylase complex subunit SAP18-like [Benincasa hispida]1.27e-10695.18Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP+QGRPSGRPLPPP   KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHHTD+DFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

TrEMBL top hitse value%identityAlignment
A0A0A0L751 Uncharacterized protein1.8e-8798.8Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAA APTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFA+RGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A1S3BLT9 histone deacetylase complex subunit SAP18-like4.8e-88100Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A5D3D7E1 Histone deacetylase complex subunit SAP18-like4.8e-88100Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1DES5 histone deacetylase complex subunit SAP18-like2.1e-8395.78Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ KAPPP PRPRFEPVDREKTCPLLLRVFTKVGGHH+DEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

A0A6J1KTJ0 histone deacetylase complex subunit SAP18-like6.3e-8092.77Show/hide
Query:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
        MDKRSRDEK SGAA AP QGRPS RPLPPPSQ KAPPP PR RFEPVDREKTCPLLLRVFTKVG HHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV
Subjt:  MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLV

Query:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL
        KEVAPEARRRNAKLSFAFVYPDKRGRFVLK VG THSYGNGRRLD SKALGELDFQIGDYLDVAI+
Subjt:  KEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP181.1e-2855.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP187.0e-5269.93Show/hide
Query:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A AA  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP188.3e-2955.74Show/hide
Query:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR
        +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV PEAR++    +FA V+ D KR  + +K++G T S   G  
Subjt:  EPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPD-KRGRFVLKQVGMTHSYGNGRR

Query:  LDDSKALGELDFQIGDYLDVAI
         DDS  L    FQIGDYLD+AI
Subjt:  LDDSKALGELDFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P185.0e-5369.93Show/hide
Query:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A AA  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G + +++VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P184.7e-5169.93Show/hide
Query:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA
        A AA  QG   GRPLPPP +     P PRP+ EPVDREKTCPLLLRVFTK GGHHT ED+A+RGKEPKDEVQIYTWKDA+LRELTDLVKEV+  ARRRNA
Subjt:  AAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNA

Query:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI
        +LSFAFVYP+ +G +    VG T +Y N ++ DDSK L EL F+IGDYLDVAI
Subjt:  KLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAGAAGCAGAGATGAGAAGACGAGCGGAGCTGCAGCTGCTCCGACGCAAGGGAGACCGTCAGGGCGGCCACTCCCTCCACCGTCTCAGACCAAAGCTCCGCC
GCCGAATCCTCGTCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACTAAGGTTGGAGGTCATCATACCGATGAGGATTTTGCAA
TTAGGGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCTAGAAGAAGA
AATGCGAAGCTTTCTTTTGCTTTTGTTTATCCCGACAAGCGTGGTCGATTTGTTTTAAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGATGATAG
CAAGGCATTGGGTGAATTGGACTTCCAGATTGGAGACTATTTGGACGTTGCAATCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAGAAGCAGAGATGAGAAGACGAGCGGAGCTGCAGCTGCTCCGACGCAAGGGAGACCGTCAGGGCGGCCACTCCCTCCACCGTCTCAGACCAAAGCTCCGCC
GCCGAATCCTCGTCCTCGTTTCGAACCCGTCGACCGCGAAAAGACTTGCCCTTTGTTGCTTCGCGTTTTTACTAAGGTTGGAGGTCATCATACCGATGAGGATTTTGCAA
TTAGGGGTAAGGAACCCAAAGATGAGGTTCAGATTTATACATGGAAAGATGCAACACTCCGGGAGCTGACCGATCTAGTTAAGGAGGTTGCTCCAGAGGCTAGAAGAAGA
AATGCGAAGCTTTCTTTTGCTTTTGTTTATCCCGACAAGCGTGGTCGATTTGTTTTAAAACAGGTGGGGATGACACATTCTTATGGAAATGGGAGGAGATTAGATGATAG
CAAGGCATTGGGTGAATTGGACTTCCAGATTGGAGACTATTTGGACGTTGCAATCCTGTAG
Protein sequenceShow/hide protein sequence
MDKRSRDEKTSGAAAAPTQGRPSGRPLPPPSQTKAPPPNPRPRFEPVDREKTCPLLLRVFTKVGGHHTDEDFAIRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEARRR
NAKLSFAFVYPDKRGRFVLKQVGMTHSYGNGRRLDDSKALGELDFQIGDYLDVAIL