CuGenDBv2

Gene ID	IVF0017059
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reticulon domain-containing protein
Genome location	chr09:8065981..8069812
RNA-Seq Expression	IVF0017059
Synteny	IVF0017059
Gene Ontology terms	GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR003388 - Reticulon IPR044177 - Reticulon-like protein B22/B23

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]

2.43e-125

100

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]

3.30e-121

97.33

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNERTSHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

XP_022150304.1 reticulon-like protein B22 [Momordica charantia]

9.27e-102

83.42

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIG R E    + MA+R+I+  T++GKP VAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S ++ PF RRGN+ TSHQDAI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]

2.12e-110

89.84

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+  SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]

2.41e-116

92.51

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIG R EGLR+T MA+R+INCKTEVGKPFVAL CGSL+YYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPF+RRGN+ TSHQDAI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQM7 Reticulon domain-containing protein

1.9e-93

97.33

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDT MASRSINCKTEVGKPFVAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISP LRRGNERTSHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

A0A1S3CPH6 reticulon-like protein B22 isoform X2

1.4e-96

100

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

A0A6J1D9M0 reticulon-like protein B22

1.7e-78

83.42

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MSQIG R E    + MA+R+I+  T++GKP VAL CGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLF+KVVVCLYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S ++ PF RRGN+ TSHQDAI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

A0A6J1GJ96 reticulon-like protein B22 isoform X1

3.3e-85

89.84

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+  SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

A0A6J1I734 reticulon-like protein B22 isoform X1

3.3e-85

89.84

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Query:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+  SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

SwissProt top hits

e value

%identity

Alignment

P0C941 Reticulon-like protein B23

2.8e-49

71.74

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Query:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    L  G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

Q8GWH5 Reticulon-like protein B22

1.7e-54

68.32

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Query:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    L  G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN +   Q+A
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA

Arabidopsis top hits

e value

%identity

Alignment

AT1G16825.1 Reticulon family protein

2.0e-50

71.74

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Query:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    L  G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KVV+CLY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS

AT1G78895.1 Reticulon family protein

1.2e-55

68.32

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Query:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK    L  G+LVYYHCA+RN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA
        KVV+CLY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN +   Q+A
Subjt:  KVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACCAATGGCGAGTCGATCAATCAACTGCAAGACAGAGGTTGGCAAACCCTTTGTTGCTCTCACTTGCGG
TTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCC
GCCATATGAACGTCTCGGTTCCAGTAGATCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACAATTGGTGCGGCTGAGTCT
GTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTTGGAAGATTGGTCTCAGGTGTTACAGTTGC
CTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTTCTTAGGAGAGGAAATGAACGTACTTCACATC
AAGATGCTATCTAA

mRNA sequence

Show/hide mRNA sequence

AAATAAAGGAGATGAAATTTAGGTGAGGAAAAGATATAGAAAATTAAAGAAAAGAAAGGTGGAAGGAAAGACTGGGCGTTATGGGTTTGACGAATCATACACTTTGATAT
TTGGCAATGCGTAGAGAGGGCGGACGATAATGAGTCAAATTGGGGGAAGGATCGAGGGTTTGAGAGACACACCAATGGCGAGTCGATCAATCAACTGCAAGACAGAGGTT
GGCAAACCCTTTGTTGCTCTCACTTGCGGTTCTTTGGTTTATTATCATTGCGCCTTTCGAAATTCCAGTCTTCTCTCCCTTGTCGCTGATGTTTTCATCGTTCTCCTTTG
CTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAACGTCTCGGTTCCAGTAGATCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGT
TAGCCAATACAATTGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCTACAGGGCATGACAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCGGTGCTT
GGAAGATTGGTCTCAGGTGTTACAGTTGCCTATACTGGTTTATGTATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTGCTATTTCTCCTTTTCT
TAGGAGAGGAAATGAACGTACTTCACATCAAGATGCTATCTAATCTTCACTGGCTGTTGCCCTGTTTTTCTTTTTTCTTTTTTTACTGTAGATGAATCTGTGAATATTAT
CGTTAACAGAATTTGTTTAGGCGGAATGGAGTAATAAAAGAATTTTAGGAGCCATTATTGATTACTGATTGACCATTGTGAGTGTTTTTTTTTTTTTTTTTGTGAAGTTG
AAGTGATTTTTGTATGGTAAAGAAAATATTTGCCAGGACAGTCACTTGGGTTAATGAAATATTTGTACCAAGTTCCAAGGGATGTTTAGAAGCAAGTTTGGTTTGATTCT
ACAATATTTGTATAGGATTTGTTAGGTTGTACTACTACGTCCTTCCATTCTAAAGTTTGGTTTGGTTTGGTTTGTTTGTTTG

Protein sequence

Show/hide protein sequence

MSQIGGRIEGLRDTPMASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAES
VLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI

IVF0017059 (gene) of Melon (IVF77) v1 genome