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IVF0017076 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017076
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:16648873..16649058
RNA-Seq ExpressionIVF0017076
SyntenyIVF0017076
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031723.1 retrotransposon protein [Cucumis melo var. makuwa]4.25e-1965.28Show/hide
Query:  MSASGWIVRVIRRREIKCERWMAERENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDDD
        MSASGWIVRVIRRREIKCERWMAE ENDDDL           R RLRS           E WEWWMAEGDDD
Subjt:  MSASGWIVRVIRRREIKCERWMAERENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDDD
TrEMBL top hitse value%identityAlignment
A0A5A7SNB3 Retrotransposon protein4.9e-1465.28Show/hide
Query:  MSASGWIVRVIRRREIKCERWMAERENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDDD
        MSASGWIVRVIRRREIKCERWMAE ENDDDL           R RLRS           E WEWWMAEGDDD
Subjt:  MSASGWIVRVIRRREIKCERWMAERENDDDLLDCSSDSAAENRIRLRS-----------EGWEWWMAEGDDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCGAGCGGTTGGATTGTTCGAGTGATTCGACGGCGGGAAATCAAATGCGAGCGGTGGATGGCGGAGAGAGAAAACGACGATGATCTGTTGGATTGTTCGAGTGA
TTCGGCGGCCGAAAATCGTATACGGCTGAGGTCTGAGGGCTGGGAGTGGTGGATGGCAGAGGGAGACGACGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCGAGCGGTTGGATTGTTCGAGTGATTCGACGGCGGGAAATCAAATGCGAGCGGTGGATGGCGGAGAGAGAAAACGACGATGATCTGTTGGATTGTTCGAGTGA
TTCGGCGGCCGAAAATCGTATACGGCTGAGGTCTGAGGGCTGGGAGTGGTGGATGGCAGAGGGAGACGACGACTGA
Protein sequenceShow/hide protein sequence
MSASGWIVRVIRRREIKCERWMAERENDDDLLDCSSDSAAENRIRLRSEGWEWWMAEGDDD