CuGenDBv2

Gene ID	IVF0017128
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Gag-pro-like protein
Genome location	chr04:14818327..14818881
RNA-Seq Expression	IVF0017128
Synteny	IVF0017128
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037703.1 uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]

7.71e-113

90.76

Show/hide

Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKKT EE D+NQNPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL  AGYLSPRFNNDEG KFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCE KNEVQKLMDAKILLVGQ+S+QEIEVD+IIDK+TSNDTSIT+ISENTISPNLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

KAA0050802.1 Gag-pro-like protein [Cucumis melo var. makuwa]

2.27e-133

100

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

KAA0055146.1 uncharacterized protein E6C27_scaffold231G00770 [Cucumis melo var. makuwa]

4.83e-115

93.48

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKK  EESD+NQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILR AGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCEFKNEVQKLMDAKILLVGQMSMQEIEVD+IIDK+TSNDTSITVIS+NTISPNLLV Q PPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

KAA0056811.1 Gag-pro-like protein [Cucumis melo var. makuwa]

1.10e-114

90.71

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVK  WLKFKKT EES++NQNPLPNHEGPAINIVDT TERYKNKVCDVTTSMNTLFQILR  GYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQ
        DCCEFKNEVQKLMDAKILLV QMSMQEI+VD+IIDK+TSNDTSITVIS+NTISPNLLV Q PPKFELNNWEIKRTLKV KGSQ
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQ

XP_016903339.1 PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]

1.19e-113

90.76

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKKT EE D+NQNPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL  AGYLSPRFNNDEG KFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCE KNEVQKLMDAKILLVGQ+S+QEIEVD+IIDK+TSNDTSIT+ISENTISPNLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E534 uncharacterized protein LOC103502838

2.3e-91

90.76

Show/hide

Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKKT EE D+NQNPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL  AGYLSPRFNNDEG KFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCE KNEVQKLMDAKILLVGQ+S+QEIEVD+IIDK+TSNDTSIT+ISENTISPNLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

A0A5A7T401 Retrotrans_gag domain-containing protein

2.3e-91

90.76

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKKT EE D+NQNPLPNHEGPAINIVD FT+RYKNKVCDVTTSMNTLFQIL  AGYLSPRFNNDEG KFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCE KNEVQKLMDAKILLVGQ+S+QEIEVD+IIDK+TSNDTSIT+ISENTISPNLLVYQCPPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

A0A5A7ULI2 Retrotrans_gag domain-containing protein

1.9e-93

93.48

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKK  EESD+NQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILR AGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCEFKNEVQKLMDAKILLVGQMSMQEIEVD+IIDK+TSNDTSITVIS+NTISPNLLV Q PPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

A0A5A7VBN6 Retrotrans_gag domain-containing protein

4.4e-90

90.22

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        +QSLVKA WLKFKKT EESD+NQNP P HEGPAINIVDTFT+RYKNKVCDVTTSMNTLFQILR AGYLSPRFNND+GEK GC NEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCEFKNEVQKLMDAKILLVGQMSMQEIEVD+IIDK+TSNDTS TVIS+NTISPNLLV Q PPKFELNNWEIKRTLKV KGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

A0A5D3C9I5 Gag-pro-like protein

6.5e-102

100

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Query:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
        MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE
Subjt:  MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIE

Query:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
        DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK
Subjt:  DCCEFKNEVQKLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCAGAGTCTAGTCAAGGCCGAATGGTTGAAATTCAAGAAGACAGGAGAAGAGTCTGACATTAACCAGAACCCTTTACCAAATCATGAGGGTCCCGCCATAAATATTGT
TGACACATTCACAGAAAGATACAAGAATAAGGTGTGTGATGTGACTACTTCAATGAATACACTTTTCCAAATCCTTCGTGGAGCTGGATATTTGTCACCAAGGTTTAACA
ATGATGAGGGGGAGAAGTTTGGATGCGCCAACGAGAAACAGTGTTTATTCCACCCTGAGATAGATGACCATTTCATTGAAGATTGTTGTGAGTTCAAGAATGAGGTACAA
AAATTGATGGATGCAAAGATTCTCTTGGTAGGACAAATGAGCATGCAAGAAATCGAGGTCGATATAATTATTGATAAGAAAACTTCAAATGATACCTCAATTACGGTTAT
CTCCGAGAATACTATTTCGCCTAATCTATTGGTTTATCAATGTCCACCAAAATTTGAGTTGAACAATTGGGAGATCAAGAGGACGCTAAAAGTCTTTAAAGGATCACAAA
AGTAA

mRNA sequence

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Protein sequence

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MQSLVKAEWLKFKKTGEESDINQNPLPNHEGPAINIVDTFTERYKNKVCDVTTSMNTLFQILRGAGYLSPRFNNDEGEKFGCANEKQCLFHPEIDDHFIEDCCEFKNEVQ
KLMDAKILLVGQMSMQEIEVDIIIDKKTSNDTSITVISENTISPNLLVYQCPPKFELNNWEIKRTLKVFKGSQK

IVF0017128 (gene) of Melon (IVF77) v1 genome