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IVF0017134 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017134
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:9166533..9167092
RNA-Seq ExpressionIVF0017134
SyntenyIVF0017134
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]1.91e-6977.94Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        M +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCIIAERDLFD+WVKSHP  +GLLHKSFPYYDDLSYVF KDRAT AR ETF D
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPD
        VGSNV NMFND +PLGDS+D+DIP MYSQGVHISPD
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPD

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.64e-7497.41Show/hide
Query:  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY
        H   EMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY
Subjt:  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY

Query:  SQGVHISPDEMFGIRA
        SQGVHISPDEMFGIRA
Subjt:  SQGVHISPDEMFGIRA

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]1.02e-6564.15Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MAEKLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CIIAE++LFD+WV+SHPA KGLL+K FPYYD+L+YVFG+DRATG  +ETF D
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSN P    D   +GD + ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]3.17e-6663.52Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MAEKLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+AE++LFD+WV+SHPA KGLL+K FPYYD+L+YVFG+DRATG  +ETF D
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSN P    D   +GD + ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]8.57e-10493.08Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW+KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSNV NMFNDTIPLGDSHDEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859536.4e-8293.08Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW+KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSNV NMFNDTIPLGDSHDEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

A0A5A7TJS2 Retrotransposon protein2.7e-5677.94Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        M +KL  TNIQ S  +DCRVKSLKK   +   MRGPSCSGFGWNE+FQCIIAERDLFD+WVKSHP  +GLLHKSFPYYDDLSYVF KDRAT AR ETF D
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPD
        VGSNV NMFND +PLGDS+D+DIP MYSQGVHISPD
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPD

A0A5A7U0H7 Retrotransposon protein6.4e-8293.08Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MAEKLPGTNIQ S  IDC VKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSW+KSHPA KGLLHKSFPYYDDLSYVFGKDRATGARSETF +
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSNV NMFNDTIPLGDSHDEDIPTMYSQGVH+SPDEMFGIRAGQASERRNCSS SKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

A0A5A7V6Q9 Retrotransposon protein1.1e-5263.52Show/hide
Query:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD
        MA+KLPG  ++A+ VIDCR+K+LK+T+ AIAEMRGP+CSGFGWN+E +CI+AE++LFD+WV+SHPA KGLL+KSFPYYD+L+YVFG+DRATG  +ETF D
Subjt:  MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD

Query:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK
        VGSN P    D   +GD  +ED P +YSQGV IS D++   R  +ASE R  SSGSKRK
Subjt:  VGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK

A0A5D3DG22 Retrotransposon protein1.3e-6197.41Show/hide
Query:  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY
        H   EMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY
Subjt:  HAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMY

Query:  SQGVHISPDEMFGIRA
        SQGVHISPDEMFGIRA
Subjt:  SQGVHISPDEMFGIRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein1.4e-0439.13Show/hide
Query:  GFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVF
        GF W+E    I A+  ++DS++K HP  +    KS P Y+DL  +F
Subjt:  GFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVF

AT2G24960.2 unknown protein2.3e-0728.21Show/hide
Query:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATG
        V+  R K L++ Y+ I  +     +GF W+     +IA+ D++++++++HP  +    K+ P Y +L ++FGK+ + G
Subjt:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATG

AT4G02210.1 unknown protein2.8e-0525.56Show/hide
Query:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSN
        V+  R K+L+  + ++  +      GF W++  Q ++A+  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +  G +
Subjt:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSN

AT4G02210.2 unknown protein2.8e-0525.56Show/hide
Query:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSN
        V+  R K+L+  + ++  +      GF W++  Q ++A+  ++D ++K HP ++    KS P Y DL  V+  D  +  ++E  +  G +
Subjt:  VIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSN

AT5G27260.1 unknown protein4.7e-0826.4Show/hide
Query:  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD--------VGSNVPNMFN
        R+K LK  Y +  +++  S SGFGW+   +   A  +++  ++K+HP  K L + +F ++D+L  +FG+  ATG  +    D         G N    + 
Subjt:  RVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVD--------VGSNVPNMFN

Query:  DTIPLGDSHDEDIPTMYSQGVHISP
        D     + ++ D  T +    H +P
Subjt:  DTIPLGDSHDEDIPTMYSQGVHISP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGGTAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATC
ATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAAT
CATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAAT
GACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAG
TGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGAAGTTGCCCGGCACTAATATCCAAGCATCACCGGTAATAGATTGTCGTGTGAAATCTCTTAAAAAAACCTACCATGCAATTGCAGAAATGAGGGGCCCATC
ATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCGCAGAACGGGATTTGTTTGATAGTTGGGTTAAGAGTCATCCTGCAACCAAAGGCCTTCTACACAAAT
CATTTCCATATTATGATGATCTGTCCTATGTCTTTGGCAAAGATCGGGCAACAGGAGCACGTTCAGAGACCTTTGTTGATGTAGGATCTAATGTGCCAAACATGTTTAAT
GACACAATTCCCCTTGGTGATTCACATGATGAAGACATCCCGACGATGTATAGCCAAGGAGTGCATATATCACCAGATGAGATGTTTGGAATACGTGCAGGTCAAGCAAG
TGAGAGAAGAAATTGTTCAAGTGGAAGTAAAAGGAAATGA
Protein sequenceShow/hide protein sequence
MAEKLPGTNIQASPVIDCRVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWVKSHPATKGLLHKSFPYYDDLSYVFGKDRATGARSETFVDVGSNVPNMFN
DTIPLGDSHDEDIPTMYSQGVHISPDEMFGIRAGQASERRNCSSGSKRK