; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0017205 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017205
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA pseudouridine synthase 6, chloroplastic-like
Genome locationchr12:22167236..22169959
RNA-Seq ExpressionIVF0017205
SyntenyIVF0017205
Gene Ontology termsGO:0000455 - enzyme-directed rRNA pseudouridine synthesis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domainsIPR006145 - Pseudouridine synthase, RsuA/RluA-like
IPR020103 - Pseudouridine synthase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056871.1 RNA pseudouridine synthase 6 [Cucumis melo var. makuwa]1.52e-230100Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRL
        VPLPKGIMTHYMRPINLAPRL
Subjt:  VPLPKGIMTHYMRPINLAPRL

XP_008441263.1 PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis melo]1.15e-232100Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
        VPLPKGIMTHYMRPINLAPRLVSR
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

XP_011652781.1 RNA pseudouridine synthase 6, chloroplastic isoform X1 [Cucumis sativus]1.00e-21995.06Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGC GLSTSL L REVARTRANLSA IS+TCF A RSFS NS AFP ESSTTDVNVTQTATNSAENGYP+YHRLLPCTSFN PPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYE+DWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKV KLYLAL A
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
        VPLPKGIMTHYMRP NLAPRLVSR
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

XP_022933180.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Cucurbita moschata]1.53e-19684.88Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        M+++LVAAHGC GL TS TLLR +ARTRANL   I   CF ARRS S  SS FP E STTD+ VTQTAT+SAENGYP+YHRLLPC SF  PPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        E GPVMEYISKSLDLPP+YVADLIHFGAV+YALVCP+PPPTA+ E+IRLFKKFT+P+FL GRKSIKGKT+ EAQKTFRIT ID+FVEVG YLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
         P+P GI+THYMRPINLAPRLVS+
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

XP_038894435.1 RNA pseudouridine synthase 6, chloroplastic-like isoform X1 [Benincasa hispida]1.47e-20187.93Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        M++SLVAAHGCRGL TSLTLLR++ARTRANLSA I   CF ARRSF L S+AFP ESST DV  TQTATNSAENGYP+YHRLLPC SFN   RVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        E GPV+EYISKSLDLPP+YVADLIHFGAVYYALVCPQP PTA+ EE RLFKKFT+PSFL GR SIKGKTLREAQ TFRITHIDEFVEVG YLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVS
         P+P GI+THYMRP+NLAPRLVS
Subjt:  VPLPKGIMTHYMRPINLAPRLVS

TrEMBL top hitse value%identityAlignment
A0A0A0LU97 PseudoU_synth_2 domain-containing protein1.5e-17395.06Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGC GLSTSL L REVARTRANLSA IS+TCF A RSFS NS AFP ESSTTDVNVTQTATNSAENGYP+YHRLLPCTSFN PPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYE+DWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKV KLYLAL A
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
        VPLPKGIMTHYMRP NLAPRLVSR
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

A0A1S3B3P1 RNA pseudouridine synthase 6, chloroplastic isoform X12.1e-183100Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
        VPLPKGIMTHYMRPINLAPRLVSR
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

A0A5A7UTP1 RNA pseudouridine synthase 68.8e-182100Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRL
        VPLPKGIMTHYMRPINLAPRL
Subjt:  VPLPKGIMTHYMRPINLAPRL

A0A6J1F482 RNA pseudouridine synthase 6, chloroplastic-like isoform X16.3e-15684.88Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        M+++LVAAHGC GL TS TLLR +ARTRANL   I   CF ARRS S  SS FP E STTD+ VTQTAT+SAENGYP+YHRLLPC SF  PPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        E GPVMEYISKSLDLPP+YVADLIHFGAV+YALVCP+PPPTA+ E+IRLFKKFT+P+FL GRKSIKGKT+ EAQKTFRIT ID+FVEVG YLRVYVHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVSR
         P+P GI+THYMRPINLAPRLVS+
Subjt:  VPLPKGIMTHYMRPINLAPRLVSR

A0A6J1JVD9 RNA pseudouridine synthase 6, chloroplastic-like isoform X12.7e-15484.21Show/hide
Query:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL
        M+++LVAA+GCRGLSTSL L R +ARTRAN SA +    F ARRS S  SSAFP ESS TDV VTQTAT  AE+GYP+YHRLLPC SF+ PPRVEHLVVL
Subjt:  MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVL

Query:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR
        EGGPVMEYI+KSLDLPP+YVADLIHFGAVYYALVCPQPPPTA+ E+IRLFKKFT+PSFL GRKSIKGKT+REAQKTFRIT IDEFVEVGTYLR++VHPKR
Subjt:  EGGPVMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKR

Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA
        FPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTT+NIEE+C TFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCS+FHRKIREKKV KLYLALAA
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAA

Query:  VPLPKGIMTHYMRPINLAPRLVS
         P+P GI+THYMRPIN+APRLVS
Subjt:  VPLPKGIMTHYMRPINLAPRLVS

SwissProt top hitse value%identityAlignment
A3BN26 RNA pseudouridine synthase 6, chloroplastic2.8e-10060.26Show/hide
Query:  RGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISK
        R LS+S  LLR   R RA L +P +           L+++A    ++T +   T          YP Y RLLPC   + PPR+EHLV  E    +++IS+
Subjt:  RGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYISK

Query:  SLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKS
        SL LPP+YVADLI FGAVYYALV PQPPP A+ E +R+F++ T+PS L  RKSIKGKT+REAQKTFR+T  ++ +E GTYLRV+VHPKRFPRCYEIDWKS
Subjt:  SLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKS

Query:  RIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAVPLPKGIMTHY
        R+IAVTD+YVVLDKPA TSVGG T+NIEE+CV F +RALGL +PL TTHQIDNC+EGCV+L++TKE+CS+FH  IREK+V K YLAL   P+  GI+THY
Subjt:  RIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAVPLPKGIMTHY

Query:  MRPINLAPRLVS
        MRPIN APRLVS
Subjt:  MRPINLAPRLVS

P57430 Ribosomal large subunit pseudouridine synthase C2.2e-0428.57Show/hide
Query:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLAL
        FP  +  +  +RI+      ++++KP+G +V G  + +    + +  +   L   L   H+ID  T G +ILA+ +      H ++REKK+ K Y+AL
Subjt:  FPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLAL

Q8K9J8 Ribosomal large subunit pseudouridine synthase C4.9e-0433.72Show/hide
Query:  IAVTDSY-VVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLAL
        I   D+Y ++++KP+G +V G  + I    + +  +   L   L   H+ID  T G ++LA+ +      H++IREKKV K Y+AL
Subjt:  IAVTDSY-VVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLAL

Q9SVS0 RNA pseudouridine synthase 6, chloroplastic3.3e-10960.98Show/hide
Query:  GCRGLSTSLTLLREVARTRAN-------------LSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEH
        G R L+  ++LLR +A TR               +S+P   TC +  ++ S N +               T ++S+ +GY EY+RL+PC ++N PPR+EH
Subjt:  GCRGLSTSLTLLREVARTRAN-------------LSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEH

Query:  LVVLEGGP-VMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY
        +VVLE    V E+ISK LDLPP+YVADLI FGAV+YALVCP+PPPTA+ EEI LF++ T PS L  R SIKGKT+REAQKTFR+TH +++ E GTYLRV+
Subjt:  LVVLEGGP-VMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY

Query:  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY
        VHPKR PRCYEIDWKSRI+AVTDSYV+LDKPAGT+VGGTT+NIEE+C TFA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K+V KLY
Subjt:  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY

Query:  LALAAVPLPKGIMTHYMRPINLAPRLVS
         ALAA PLP GI++HYMRP N+APRLV+
Subjt:  LALAAVPLPKGIMTHYMRPINLAPRLVS

Arabidopsis top hitse value%identityAlignment
AT4G21770.1 Pseudouridine synthase family protein2.3e-11060.98Show/hide
Query:  GCRGLSTSLTLLREVARTRAN-------------LSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEH
        G R L+  ++LLR +A TR               +S+P   TC +  ++ S N +               T ++S+ +GY EY+RL+PC ++N PPR+EH
Subjt:  GCRGLSTSLTLLREVARTRAN-------------LSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEH

Query:  LVVLEGGP-VMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY
        +VVLE    V E+ISK LDLPP+YVADLI FGAV+YALVCP+PPPTA+ EEI LF++ T PS L  R SIKGKT+REAQKTFR+TH +++ E GTYLRV+
Subjt:  LVVLEGGP-VMEYISKSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVY

Query:  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY
        VHPKR PRCYEIDWKSRI+AVTDSYV+LDKPAGT+VGGTT+NIEE+C TFA+RAL L  PL TTHQIDNCTEGCV+ ARTKEYCS+FH KIR K+V KLY
Subjt:  VHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLY

Query:  LALAAVPLPKGIMTHYMRPINLAPRLVS
         ALAA PLP GI++HYMRP N+APRLV+
Subjt:  LALAAVPLPKGIMTHYMRPINLAPRLVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCTCTCTGGTGGCCGCCCATGGTTGTCGTGGCCTCAGTACATCACTTACCCTGCTGCGCGAAGTGGCGAGAACTCGTGCTAATCTCAGTGCTCCCATTTCCAC
CACTTGCTTTACTGCTCGGCGTTCTTTTAGTTTGAATAGTAGCGCGTTCCCTGGTGAATCCTCAACAACAGACGTGAACGTTACACAAACTGCTACTAATTCTGCAGAAA
ATGGGTATCCTGAATATCATCGTTTGCTTCCATGTACTTCATTCAATGCCCCACCACGAGTTGAACATCTGGTCGTTTTGGAAGGGGGACCTGTTATGGAATACATCTCT
AAATCCTTGGATCTTCCTCCTATGTATGTTGCAGATCTCATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCGCCAACTGCATCCTCCGAGGAAAT
TAGACTATTCAAAAAATTTACACAACCATCATTTTTGATAGGGCGAAAATCTATCAAGGGGAAAACCTTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATCGATG
AGTTTGTTGAAGTTGGAACATACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGATTGGAAATCGAGAATTATCGCTGTGACAGATTCCTAT
GTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTAACAACATCGAAGAAACTTGTGTAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCTTTGTG
GACTACCCATCAGATTGACAACTGCACCGAGGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAAGGTTATGAAGC
TTTATCTTGCTCTTGCTGCTGTTCCCCTGCCAAAGGGAATAATGACACACTATATGCGGCCAATTAATTTGGCTCCTAGACTCGTTTCAAGAGGCAAGTTTCACAATCAA
GCATTCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTCTCTCTGGTGGCCGCCCATGGTTGTCGTGGCCTCAGTACATCACTTACCCTGCTGCGCGAAGTGGCGAGAACTCGTGCTAATCTCAGTGCTCCCATTTCCAC
CACTTGCTTTACTGCTCGGCGTTCTTTTAGTTTGAATAGTAGCGCGTTCCCTGGTGAATCCTCAACAACAGACGTGAACGTTACACAAACTGCTACTAATTCTGCAGAAA
ATGGGTATCCTGAATATCATCGTTTGCTTCCATGTACTTCATTCAATGCCCCACCACGAGTTGAACATCTGGTCGTTTTGGAAGGGGGACCTGTTATGGAATACATCTCT
AAATCCTTGGATCTTCCTCCTATGTATGTTGCAGATCTCATTCATTTTGGTGCAGTATATTATGCCCTAGTATGCCCACAGCCTCCGCCAACTGCATCCTCCGAGGAAAT
TAGACTATTCAAAAAATTTACACAACCATCATTTTTGATAGGGCGAAAATCTATCAAGGGGAAAACCTTGAGAGAAGCACAGAAGACTTTCCGGATAACTCATATCGATG
AGTTTGTTGAAGTTGGAACATACTTGCGTGTTTATGTGCATCCCAAACGCTTTCCAAGGTGCTATGAAATTGATTGGAAATCGAGAATTATCGCTGTGACAGATTCCTAT
GTGGTTTTGGACAAACCTGCTGGTACATCGGTTGGAGGCACTACTAACAACATCGAAGAAACTTGTGTAACCTTTGCAACTCGTGCTTTAGGATTAACATCTCCTTTGTG
GACTACCCATCAGATTGACAACTGCACCGAGGGCTGCGTCATTCTTGCTAGGACAAAAGAATATTGCTCCATCTTCCATCGTAAAATCAGAGAGAAAAAGGTTATGAAGC
TTTATCTTGCTCTTGCTGCTGTTCCCCTGCCAAAGGGAATAATGACACACTATATGCGGCCAATTAATTTGGCTCCTAGACTCGTTTCAAGAGGCAAGTTTCACAATCAA
GCATTCAAATAA
Protein sequenceShow/hide protein sequence
MDVSLVAAHGCRGLSTSLTLLREVARTRANLSAPISTTCFTARRSFSLNSSAFPGESSTTDVNVTQTATNSAENGYPEYHRLLPCTSFNAPPRVEHLVVLEGGPVMEYIS
KSLDLPPMYVADLIHFGAVYYALVCPQPPPTASSEEIRLFKKFTQPSFLIGRKSIKGKTLREAQKTFRITHIDEFVEVGTYLRVYVHPKRFPRCYEIDWKSRIIAVTDSY
VVLDKPAGTSVGGTTNNIEETCVTFATRALGLTSPLWTTHQIDNCTEGCVILARTKEYCSIFHRKIREKKVMKLYLALAAVPLPKGIMTHYMRPINLAPRLVSRGKFHNQ
AFK