CuGenDBv2

Gene ID	IVF0017213
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chromatin assembly factor 1 subunit A
Genome location	tig00000135:226607..229480
RNA-Seq Expression	IVF0017213
Synteny	IVF0017213
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6582480.1 hypothetical protein SDJN03_22482, partial [Cucurbita argyrosperma subsp. sororia]

8.47e-97

83.94

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MA  S S IR ATNLSNNLLRSFSTSIKSAH+NNH QTH+YLEA++F+GSW+APKDPKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLEK++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAK RAEERK+ADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E +RRQSS W+DE KLEEKLL+AIVNT+ L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

XP_004133989.1 chromatin assembly factor 1 subunit A [Cucumis sativus]

5.51e-109

93.78

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEKKKEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

XP_008438350.1 PREDICTED: LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A [Cucumis melo]

2.19e-115

99.48

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEK KEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

XP_022980429.1 uncharacterized protein LOC111479798 [Cucurbita maxima]

1.47e-97

84.46

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIKSAH+NNH QTH+YLEA++F+GSW+APKDPKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLEK+ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAK RAEERK+ADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E++RRQSS W+DE KLEEKLL+AIVNT+ L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

XP_038892259.1 chromatin assembly factor 1 subunit A [Benincasa hispida]

4.40e-99

86.01

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAF   S IR AT+LSNNLLRS STS KSAH+NNH QTH+YLEAN+FIGSW+APKDPKEAQA+LA+LRR+YAKQ+KQVRKNYIQEVELLRLEKE+KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTLMKERAEKLEHWRMMEKKR+EKKKEK +LLRRQSS W+DENKLEEKLL+AIVNT  L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7X4 Uncharacterized protein

2.9e-84

93.78

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIK+A +NNHLQT EYLEANSFIGSWQAPK+PKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLE+EQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        +EALRVANEERKKLKAEAAKVRAEERK+ADEEFRLTL+KERAEKLEHWRMMEKKREEKKKEKKELLRRQSS W+DENKLEEKLLEAIVNT+TL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

A0A1S3AWS6 LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit A

3.9e-89

99.48

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEK KEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

A0A6J1E8D4 UPF0329 protein ECU05_1680/ECU11_0050-like

1.2e-74

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MA  S S IR ATN+SNNLLRSFSTSIKSAH+NNH QTH+YLEA++F+GSW+APKDPKEAQA+LA LRR+YAKQVKQVRKNYIQEVE+LRLEK++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAK RAEERK+ADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E +RRQSS W+DE KLEEKLL+AIVNT+ L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

A0A6J1FLI1 UPF0329 protein ECU05_1680/ECU11_0050-like

6.6e-73

83.42

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MAFAS S IR ATN S+ LLRSFSTS KSAH+NNH QTH+YLEAN+F+GSW+APKDPKEAQARLA LRR+YAK+VKQVRKNYIQEVELLRLEK++KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRV NEERKKLKAEAAK RAEERK+ADEEFR TLMKERAEKLEHWRMMEK REEKK EK EL+RRQS  WIDE KLEEKLL+AIVNT  L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

A0A6J1IZ92 uncharacterized protein LOC111479798

1.4e-75

84.46

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Query:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK
        MA  S S IR+ATNLSNNLLRSFSTSIKSAH+NNH QTH+YLEA++F+GSW+APKDPKEAQA+LA LRR+YAKQVKQVRKNYIQEVELLRLEK+ KDEAK
Subjt:  MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAK

Query:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        REALRVANEERKKLKAEAAK RAEERK+ADEEFR TLMKER EKLEHWRMMEKKREEKKKEK E++RRQSS W+DE KLEEKLL+AIVNT+ L
Subjt:  REALRVANEERKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G49210.1 unknown protein

6.2e-47

62.07

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Query:  LRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAA
        LRSFS    + H+  H +TH +LE   +IGSW+AP DPK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+EK++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAA

Query:  KVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        KVRAEERKIADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS WI++ +LE K+ EA+V+ V L
Subjt:  KVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

AT5G49210.2 unknown protein

6.2e-47

62.07

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Query:  LRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAA
        LRSFS    + H+  H +TH +LE   +IGSW+AP DPK+A+ +LA+LRR+YAK+V+  RK YI E+E+LR+EK++KDEA+  A R ANEER+ LKAEAA
Subjt:  LRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEERKKLKAEAA

Query:  KVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL
        KVRAEERKIADEEFR TL+KERAEKLE W+MM +KREEK KE+++LLR QSS WI++ +LE K+ EA+V+ V L
Subjt:  KVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTTCCATCAAATCCGCTCACAATAACAATCACCTGCA
GACCCACGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCGCCGAAAGACCCCAAGGAAGCGCAGGCCAGACTTGCTCGGCTCCGAAGGGAGTACGCCAAGC
AGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACGAAGCCAAGAGGGAAGCGCTTAGGGTTGCCAATGAGGAA
CGCAAGAAGCTCAAAGCTGAAGCTGCTAAAGTCCGAGCAGAAGAGCGTAAGATTGCTGACGAAGAGTTCCGACTGACTTTGATGAAAGAGAGAGCTGAGAAGCTGGAGCA
TTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTTCTAAGACGGCAGAGTTCCACTTGGATTGATGAAAATAAATTGGAAGAGAAGTTAT
TAGAAGCCATTGTTAATACCGTCACTCTCTGA

mRNA sequence

Show/hide mRNA sequence

AAGCGAATCGTTTTCACGGTGCTCAACTCGTTGTGGCAGCCAACCCTACTCTTATTTCTCTCTCTCTACTCTCACTCCCCAAGCTGCCATTTGCAAAATGCTTCCATCCC
GAGTTCTATGATCGACTTTTTTTTTTTATTTTTTGTTCTTCAATTCGAAAAGTTGAAATCTTGTCTAATCCGACCTGTTTTTGTTCGATATTTTTTTTTTCCAAATAGTT
TTGATTTTGAATCCCAGAAGCTTGTACGATACCAATGGCGTTTGCGTCTGGTTCCGTGATCCGCAATGCAACCAATCTCTCTAATAACCTTCTTCGTTCCTTCTCCACTT
CCATCAAATCCGCTCACAATAACAATCACCTGCAGACCCACGAATACTTGGAGGCGAACAGCTTTATTGGTAGCTGGCAGGCGCCGAAAGACCCCAAGGAAGCGCAGGCC
AGACTTGCTCGGCTCCGAAGGGAGTACGCCAAGCAGGTGAAACAGGTACGTAAGAATTACATCCAGGAGGTTGAACTCTTGAGGCTCGAAAAGGAGCAGAAGGACGAAGC
CAAGAGGGAAGCGCTTAGGGTTGCCAATGAGGAACGCAAGAAGCTCAAAGCTGAAGCTGCTAAAGTCCGAGCAGAAGAGCGTAAGATTGCTGACGAAGAGTTCCGACTGA
CTTTGATGAAAGAGAGAGCTGAGAAGCTGGAGCATTGGAGAATGATGGAAAAGAAGAGGGAAGAAAAAAAGAAAGAAAAGAAGGAGCTTCTAAGACGGCAGAGTTCCACT
TGGATTGATGAAAATAAATTGGAAGAGAAGTTATTAGAAGCCATTGTTAATACCGTCACTCTCTGAGCTTTCTTACTTTCCAGCAATAATTGCCCAACTTTCTCTTGCGT
TTCTTTGTTAGAAGCAATATTTACTGGATTCTGGCTGATGTGTTTCTACATAGTCCAAGTTTTTGACTTTTGTGATGAAGCACTCGAAATCTTGCGCACGGTCGTATCCT
TTTGTTACTGTTATTATTATCATTAGGGAGAAAATCAGTTTCTACTATGTTGTAGCATTTAAAACTTCAAGCTAATAATTCTATCGATTTAAAAATATGTTATCTTC

Protein sequence

Show/hide protein sequence

MAFASGSVIRNATNLSNNLLRSFSTSIKSAHNNNHLQTHEYLEANSFIGSWQAPKDPKEAQARLARLRREYAKQVKQVRKNYIQEVELLRLEKEQKDEAKREALRVANEE
RKKLKAEAAKVRAEERKIADEEFRLTLMKERAEKLEHWRMMEKKREEKKKEKKELLRRQSSTWIDENKLEEKLLEAIVNTVTL

IVF0017213 (gene) of Melon (IVF77) v1 genome