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IVF0017252 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0017252
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol protein
Genome locationchr03:3271010..3271255
RNA-Seq ExpressionIVF0017252
SyntenyIVF0017252
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055032.1 pol protein [Cucumis melo var. makuwa]7.68e-27100Show/hide
Query:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
        MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
Subjt:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
TYK21774.1 pol protein [Cucumis melo var. makuwa]6.26e-0880.49Show/hide
Query:  PSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAAVG
        PSPP+ FSV SPPPSS  AT SLRRQLRTN RES VSAAVG
Subjt:  PSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAAVG
TYK24446.1 pol protein [Cucumis melo var. makuwa]6.31e-25100Show/hide
Query:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
        MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
Subjt:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
TrEMBL top hitse value%identityAlignment
A0A5A7UGT9 Pol protein4.7e-20100Show/hide
Query:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
        MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
Subjt:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAA
A0A5D3DDX8 Pol protein1.1e-0563.79Show/hide
Query:  PPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAAVG
        PP +S+    A      PSPP+ FSV SPPPSS  AT SLRRQLRTN RES VSAAVG
Subjt:  PPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAAVG
A0A5D3DLD4 Pol protein2.6e-18100Show/hide
Query:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
        MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
Subjt:  MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCACCGCCCGCTTTAAGTTCCTCCTCCTCTGTAGCTGTCCGCCTCGCAACGTTGCCGTCCCCTCCTGTCGATTTCAGCGTTCCGTCTCCGCCGCCATCGTCCGC
ACATGCGACGACATCTCTACGCCGGCAGCTTCGGACGAACGCAAGGGAGTCGGCCGTCTCTGCCGCAGTCGGTTTTAGCAAGCACCTATGTGAAGCCGAGCCAAGTCAAG
CCGAGTCGAGTCGAAAACCGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCACCGCCCGCTTTAAGTTCCTCCTCCTCTGTAGCTGTCCGCCTCGCAACGTTGCCGTCCCCTCCTGTCGATTTCAGCGTTCCGTCTCCGCCGCCATCGTCCGC
ACATGCGACGACATCTCTACGCCGGCAGCTTCGGACGAACGCAAGGGAGTCGGCCGTCTCTGCCGCAGTCGGTTTTAGCAAGCACCTATGTGAAGCCGAGCCAAGTCAAG
CCGAGTCGAGTCGAAAACCGAGCTGA
Protein sequenceShow/hide protein sequence
MPPPPALSSSSSVAVRLATLPSPPVDFSVPSPPPSSAHATTSLRRQLRTNARESAVSAAVGFSKHLCEAEPSQAESSRKPS